Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
BEST1O76090 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
BEST1O76090 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
BEST1O76090 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
BEST1O76090 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
BEST1O76090 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
BEST1O76090 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
BEST1O76090 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
BEST1O76090 PGR-210ENST00000619228 3038 ntTSL 5 BASIC16.32■□□□□ 0.2
BEST1O76090 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
BEST1O76090 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
BEST1O76090 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
BEST1O76090 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
BEST1O76090 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
BEST1O76090 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
BEST1O76090 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
BEST1O76090 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
BEST1O76090 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
BEST1O76090 AGER-206ENST00000375070 1463 ntTSL 5 BASIC16.32■□□□□ 0.2
BEST1O76090 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
BEST1O76090 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC16.32■□□□□ 0.2
BEST1O76090 SUN1-204ENST00000403868 978 ntTSL 2 BASIC16.32■□□□□ 0.2
BEST1O76090 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
BEST1O76090 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
BEST1O76090 AL162726.2-201ENST00000438986 1017 ntBASIC16.32■□□□□ 0.2
BEST1O76090 TTTY23B-201ENST00000442790 549 ntBASIC16.32■□□□□ 0.2
BEST1O76090 AL138799.1-201ENST00000448213 1675 ntBASIC16.32■□□□□ 0.2
BEST1O76090 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC16.32■□□□□ 0.2
BEST1O76090 NEU3-203ENST00000529024 581 ntTSL 3 BASIC16.32■□□□□ 0.2
BEST1O76090 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
BEST1O76090 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
BEST1O76090 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
BEST1O76090 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC16.32■□□□□ 0.2
BEST1O76090 AC008735.3-201ENST00000596646 500 ntBASIC16.32■□□□□ 0.2
BEST1O76090 AC112693.3-201ENST00000624819 1983 ntBASIC16.32■□□□□ 0.2
BEST1O76090 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC16.32■□□□□ 0.2
BEST1O76090 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
BEST1O76090 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
BEST1O76090 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC16.32■□□□□ 0.2
BEST1O76090 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC16.32■□□□□ 0.2
BEST1O76090 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
BEST1O76090 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
BEST1O76090 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
BEST1O76090 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
BEST1O76090 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC16.31■□□□□ 0.2
BEST1O76090 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
BEST1O76090 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC16.31■□□□□ 0.2
BEST1O76090 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC16.31■□□□□ 0.2
BEST1O76090 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
BEST1O76090 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
BEST1O76090 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
BEST1O76090 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
BEST1O76090 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
BEST1O76090 TEX30-203ENST00000376022 828 ntTSL 2 BASIC16.31■□□□□ 0.2
BEST1O76090 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
BEST1O76090 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC16.31■□□□□ 0.2
BEST1O76090 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC16.31■□□□□ 0.2
BEST1O76090 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC16.31■□□□□ 0.2
BEST1O76090 AC007389.4-201ENST00000454674 793 ntBASIC16.31■□□□□ 0.2
BEST1O76090 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC16.31■□□□□ 0.2
BEST1O76090 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC16.31■□□□□ 0.2
BEST1O76090 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
BEST1O76090 CFL1-212ENST00000531413 636 ntTSL 3 BASIC16.31■□□□□ 0.2
BEST1O76090 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC16.31■□□□□ 0.2
BEST1O76090 MIR5189-201ENST00000577370 114 ntBASIC16.31■□□□□ 0.2
BEST1O76090 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC16.31■□□□□ 0.2
BEST1O76090 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
BEST1O76090 AC093813.1-201ENST00000605066 256 ntBASIC16.31■□□□□ 0.2
BEST1O76090 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC16.31■□□□□ 0.2
BEST1O76090 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC16.31■□□□□ 0.2
BEST1O76090 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC16.31■□□□□ 0.2
BEST1O76090 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC16.31■□□□□ 0.2
BEST1O76090 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
BEST1O76090 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
BEST1O76090 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC16.31■□□□□ 0.2
BEST1O76090 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
BEST1O76090 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
BEST1O76090 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
BEST1O76090 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
BEST1O76090 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
BEST1O76090 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
BEST1O76090 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
BEST1O76090 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC16.31■□□□□ 0.2
BEST1O76090 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
BEST1O76090 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
BEST1O76090 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
BEST1O76090 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
BEST1O76090 MBP-202ENST00000355994 2772 ntTSL 5 BASIC16.31■□□□□ 0.2
BEST1O76090 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
BEST1O76090 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
BEST1O76090 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
BEST1O76090 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
BEST1O76090 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
BEST1O76090 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC16.3■□□□□ 0.2
BEST1O76090 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
BEST1O76090 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
BEST1O76090 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
BEST1O76090 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC16.3■□□□□ 0.2
BEST1O76090 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
BEST1O76090 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms