Protein–RNA interactions for Protein: O60925

PFDN1, Prefoldin subunit 1, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1O60925 AC022400.8-201ENST00000623453 3599 ntBASIC13.94□□□□□ -0.18
PFDN1O60925 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC13.94□□□□□ -0.18
PFDN1O60925 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
PFDN1O60925 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
PFDN1O60925 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
PFDN1O60925 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC13.94□□□□□ -0.18
PFDN1O60925 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC13.94□□□□□ -0.18
PFDN1O60925 WARS2-201ENST00000235521 2800 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
PFDN1O60925 PGGHG-204ENST00000409655 2963 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
PFDN1O60925 ZBTB7B-203ENST00000417934 4017 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
PFDN1O60925 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
PFDN1O60925 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
PFDN1O60925 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
PFDN1O60925 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
PFDN1O60925 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC13.94□□□□□ -0.18
PFDN1O60925 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
PFDN1O60925 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
PFDN1O60925 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC13.94□□□□□ -0.18
PFDN1O60925 RASA4-203ENST00000461209 3244 ntTSL 2 BASIC13.94□□□□□ -0.18
PFDN1O60925 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC13.94□□□□□ -0.18
PFDN1O60925 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
PFDN1O60925 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
PFDN1O60925 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC13.94□□□□□ -0.18
PFDN1O60925 ACTG1-206ENST00000573283 2002 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
PFDN1O60925 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC13.94□□□□□ -0.18
PFDN1O60925 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
PFDN1O60925 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC13.94□□□□□ -0.18
PFDN1O60925 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC13.94□□□□□ -0.18
PFDN1O60925 ADAM19-203ENST00000517905 3312 ntTSL 5 BASIC13.94□□□□□ -0.18
PFDN1O60925 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
PFDN1O60925 PPCDC-201ENST00000342932 2250 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
PFDN1O60925 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
PFDN1O60925 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
PFDN1O60925 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
PFDN1O60925 C17orf53-203ENST00000585683 2529 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
PFDN1O60925 AL133387.2-201ENST00000422661 2222 ntTSL 2 BASIC13.94□□□□□ -0.18
PFDN1O60925 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
PFDN1O60925 CPT1C-204ENST00000405931 2785 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
PFDN1O60925 ILF3-201ENST00000250241 3035 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
PFDN1O60925 PDE2A-218ENST00000540345 3027 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
PFDN1O60925 AL353732.1-201ENST00000569618 1459 ntBASIC13.93□□□□□ -0.18
PFDN1O60925 CCR7-201ENST00000246657 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
PFDN1O60925 GOSR2-235ENST00000640269 2190 ntTSL 5 BASIC13.93□□□□□ -0.18
PFDN1O60925 NEDD4L-208ENST00000456173 4978 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
PFDN1O60925 SCN1B-202ENST00000415950 4537 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
PFDN1O60925 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC13.93□□□□□ -0.18
PFDN1O60925 PRR3-202ENST00000376560 2254 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
PFDN1O60925 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC13.93□□□□□ -0.18
PFDN1O60925 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
PFDN1O60925 CACNA1G-225ENST00000512389 6837 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
PFDN1O60925 TRAF3-208ENST00000560371 7640 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
PFDN1O60925 SLC5A5-201ENST00000222248 3576 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
PFDN1O60925 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
PFDN1O60925 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
PFDN1O60925 ZBTB42-201ENST00000342537 3800 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
PFDN1O60925 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC13.93□□□□□ -0.18
PFDN1O60925 KRT16P5-201ENST00000455284 522 ntBASIC13.93□□□□□ -0.18
PFDN1O60925 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC13.93□□□□□ -0.18
PFDN1O60925 AC008040.2-201ENST00000461049 708 ntBASIC13.93□□□□□ -0.18
PFDN1O60925 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
PFDN1O60925 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC13.93□□□□□ -0.18
PFDN1O60925 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
PFDN1O60925 DUX4L17-201ENST00000557360 1267 ntBASIC13.93□□□□□ -0.18
PFDN1O60925 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC13.93□□□□□ -0.18
PFDN1O60925 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC13.93□□□□□ -0.18
PFDN1O60925 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC13.93□□□□□ -0.18
PFDN1O60925 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC13.93□□□□□ -0.18
PFDN1O60925 ITGA3-201ENST00000007722 3665 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
PFDN1O60925 DGCR2-201ENST00000263196 4480 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
PFDN1O60925 KCNJ5-202ENST00000529694 5940 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
PFDN1O60925 COL3A1-201ENST00000304636 5543 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
PFDN1O60925 KDM3A-216ENST00000542128 4311 ntTSL 5 BASIC13.93□□□□□ -0.18
PFDN1O60925 C9orf106-201ENST00000316786 3145 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
PFDN1O60925 GSN-209ENST00000449733 2702 ntTSL 2 BASIC13.93□□□□□ -0.18
PFDN1O60925 GATAD2A-203ENST00000404158 5776 ntAPPRIS ALT1 TSL 2 BASIC13.93□□□□□ -0.18
PFDN1O60925 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
PFDN1O60925 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
PFDN1O60925 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
PFDN1O60925 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC13.93□□□□□ -0.18
PFDN1O60925 NPNT-211ENST00000506666 2187 ntTSL 2 BASIC13.93□□□□□ -0.18
PFDN1O60925 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC13.93□□□□□ -0.18
PFDN1O60925 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
PFDN1O60925 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
PFDN1O60925 SRGAP3-202ENST00000383836 8656 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
PFDN1O60925 ITGA2B-201ENST00000262407 3333 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
PFDN1O60925 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
PFDN1O60925 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
PFDN1O60925 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
PFDN1O60925 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
PFDN1O60925 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
PFDN1O60925 DYSF-203ENST00000409366 6606 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
PFDN1O60925 DYSF-205ENST00000409651 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
PFDN1O60925 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC13.93□□□□□ -0.18
PFDN1O60925 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
PFDN1O60925 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
PFDN1O60925 ATXN2L-225ENST00000570200 3635 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
PFDN1O60925 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
PFDN1O60925 ZNF721-205ENST00000511833 2966 ntAPPRIS P1 TSL 4 BASIC13.92□□□□□ -0.18
PFDN1O60925 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
PFDN1O60925 KCNJ14-202ENST00000391884 3990 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms