Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ACTN4O43707 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
ACTN4O43707 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ACTN4O43707 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ACTN4O43707 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC17.55■□□□□ 0.4
ACTN4O43707 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ACTN4O43707 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC17.55■□□□□ 0.4
ACTN4O43707 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ACTN4O43707 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
ACTN4O43707 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC17.55■□□□□ 0.4
ACTN4O43707 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
ACTN4O43707 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ACTN4O43707 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ACTN4O43707 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
ACTN4O43707 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ACTN4O43707 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC17.54■□□□□ 0.4
ACTN4O43707 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ACTN4O43707 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
ACTN4O43707 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
ACTN4O43707 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC17.54■□□□□ 0.4
ACTN4O43707 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ACTN4O43707 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC17.54■□□□□ 0.4
ACTN4O43707 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ACTN4O43707 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC17.54■□□□□ 0.4
ACTN4O43707 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC17.54■□□□□ 0.4
ACTN4O43707 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ACTN4O43707 RPL13P2-201ENST00000440687 659 ntBASIC17.54■□□□□ 0.4
ACTN4O43707 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ACTN4O43707 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ACTN4O43707 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC17.54■□□□□ 0.4
ACTN4O43707 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC17.54■□□□□ 0.4
ACTN4O43707 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC17.54■□□□□ 0.4
ACTN4O43707 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC17.54■□□□□ 0.4
ACTN4O43707 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC17.54■□□□□ 0.4
ACTN4O43707 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC17.54■□□□□ 0.4
ACTN4O43707 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC17.54■□□□□ 0.4
ACTN4O43707 AL596442.2-201ENST00000610240 980 ntBASIC17.54■□□□□ 0.4
ACTN4O43707 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
ACTN4O43707 LINC01101-201ENST00000622953 1884 ntBASIC17.54■□□□□ 0.4
ACTN4O43707 DEK-201ENST00000244776 1441 ntTSL 2 BASIC17.54■□□□□ 0.4
ACTN4O43707 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC17.54■□□□□ 0.4
ACTN4O43707 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ACTN4O43707 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ACTN4O43707 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
ACTN4O43707 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC17.53■□□□□ 0.4
ACTN4O43707 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ACTN4O43707 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC17.53■□□□□ 0.4
ACTN4O43707 AC068587.6-202ENST00000641839 5619 ntBASIC17.53■□□□□ 0.4
ACTN4O43707 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC17.53■□□□□ 0.4
ACTN4O43707 AC106881.1-201ENST00000605849 3329 ntBASIC17.53■□□□□ 0.4
ACTN4O43707 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ACTN4O43707 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
ACTN4O43707 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
ACTN4O43707 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ACTN4O43707 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
ACTN4O43707 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
ACTN4O43707 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ACTN4O43707 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC17.53■□□□□ 0.4
ACTN4O43707 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
ACTN4O43707 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
ACTN4O43707 RAD18-204ENST00000418463 563 ntTSL 4 BASIC17.53■□□□□ 0.4
ACTN4O43707 RAD18-205ENST00000421052 582 ntTSL 3 BASIC17.53■□□□□ 0.4
ACTN4O43707 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC17.53■□□□□ 0.4
ACTN4O43707 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC17.53■□□□□ 0.4
ACTN4O43707 DNAJB3-202ENST00000449667 1266 ntBASIC17.53■□□□□ 0.4
ACTN4O43707 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC17.53■□□□□ 0.4
ACTN4O43707 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC17.53■□□□□ 0.4
ACTN4O43707 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC17.53■□□□□ 0.4
ACTN4O43707 AC015910.1-201ENST00000579400 975 ntBASIC17.53■□□□□ 0.4
ACTN4O43707 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC17.53■□□□□ 0.4
ACTN4O43707 TEX28P1-201ENST00000613479 1221 ntBASIC17.53■□□□□ 0.4
ACTN4O43707 TEX28P2-201ENST00000617764 1221 ntBASIC17.53■□□□□ 0.4
ACTN4O43707 AF228730.6-201ENST00000641497 218 ntBASIC17.53■□□□□ 0.4
ACTN4O43707 AC084121.3-201ENST00000641716 218 ntBASIC17.53■□□□□ 0.4
ACTN4O43707 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC17.53■□□□□ 0.4
ACTN4O43707 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
ACTN4O43707 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ACTN4O43707 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
ACTN4O43707 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC17.53■□□□□ 0.4
ACTN4O43707 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
ACTN4O43707 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
ACTN4O43707 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC17.53■□□□□ 0.4
ACTN4O43707 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC17.53■□□□□ 0.4
ACTN4O43707 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
ACTN4O43707 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
ACTN4O43707 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC17.52■□□□□ 0.4
ACTN4O43707 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
ACTN4O43707 ING5-213ENST00000636051 4199 ntTSL 5 BASIC17.52■□□□□ 0.4
ACTN4O43707 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
ACTN4O43707 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
ACTN4O43707 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
ACTN4O43707 AJ011931.1-201ENST00000618749 2492 ntBASIC17.52■□□□□ 0.4
ACTN4O43707 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
ACTN4O43707 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
ACTN4O43707 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
ACTN4O43707 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
ACTN4O43707 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
ACTN4O43707 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC17.52■□□□□ 0.4
ACTN4O43707 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC17.52■□□□□ 0.4
ACTN4O43707 HLA-V-204ENST00000476601 1289 ntBASIC17.52■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms