Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ATP2A1O14983 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC17.82■□□□□ 0.44
ATP2A1O14983 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
ATP2A1O14983 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
ATP2A1O14983 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
ATP2A1O14983 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ATP2A1O14983 AC112504.1-201ENST00000623415 1841 ntBASIC17.82■□□□□ 0.44
ATP2A1O14983 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
ATP2A1O14983 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC17.81■□□□□ 0.44
ATP2A1O14983 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC17.81■□□□□ 0.44
ATP2A1O14983 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
ATP2A1O14983 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
ATP2A1O14983 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
ATP2A1O14983 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ATP2A1O14983 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
ATP2A1O14983 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
ATP2A1O14983 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
ATP2A1O14983 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
ATP2A1O14983 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ATP2A1O14983 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
ATP2A1O14983 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
ATP2A1O14983 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC17.81■□□□□ 0.44
ATP2A1O14983 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
ATP2A1O14983 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC17.81■□□□□ 0.44
ATP2A1O14983 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
ATP2A1O14983 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
ATP2A1O14983 GUK1-206ENST00000366723 845 ntTSL 5 BASIC17.81■□□□□ 0.44
ATP2A1O14983 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ATP2A1O14983 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
ATP2A1O14983 TPO-206ENST00000382269 1155 ntTSL 5 BASIC17.81■□□□□ 0.44
ATP2A1O14983 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC17.81■□□□□ 0.44
ATP2A1O14983 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
ATP2A1O14983 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC17.81■□□□□ 0.44
ATP2A1O14983 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC17.81■□□□□ 0.44
ATP2A1O14983 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC17.81■□□□□ 0.44
ATP2A1O14983 AC025181.2-201ENST00000606994 802 ntBASIC17.81■□□□□ 0.44
ATP2A1O14983 BX539320.1-201ENST00000623759 877 ntBASIC17.81■□□□□ 0.44
ATP2A1O14983 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ATP2A1O14983 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC17.81■□□□□ 0.44
ATP2A1O14983 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC17.81■□□□□ 0.44
ATP2A1O14983 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC17.81■□□□□ 0.44
ATP2A1O14983 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
ATP2A1O14983 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
ATP2A1O14983 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
ATP2A1O14983 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC17.81■□□□□ 0.44
ATP2A1O14983 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
ATP2A1O14983 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ATP2A1O14983 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC17.81■□□□□ 0.44
ATP2A1O14983 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
ATP2A1O14983 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
ATP2A1O14983 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
ATP2A1O14983 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ATP2A1O14983 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ATP2A1O14983 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ATP2A1O14983 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ATP2A1O14983 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ATP2A1O14983 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
ATP2A1O14983 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
ATP2A1O14983 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ATP2A1O14983 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC17.8■□□□□ 0.44
ATP2A1O14983 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ATP2A1O14983 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
ATP2A1O14983 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC17.8■□□□□ 0.44
ATP2A1O14983 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
ATP2A1O14983 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ATP2A1O14983 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
ATP2A1O14983 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC17.8■□□□□ 0.44
ATP2A1O14983 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC17.8■□□□□ 0.44
ATP2A1O14983 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
ATP2A1O14983 PRSS30P-206ENST00000641773 873 ntBASIC17.8■□□□□ 0.44
ATP2A1O14983 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC17.8■□□□□ 0.44
ATP2A1O14983 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
ATP2A1O14983 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
ATP2A1O14983 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
ATP2A1O14983 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ATP2A1O14983 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC17.8■□□□□ 0.44
ATP2A1O14983 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
ATP2A1O14983 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ATP2A1O14983 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC17.8■□□□□ 0.44
ATP2A1O14983 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
ATP2A1O14983 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ATP2A1O14983 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC17.79■□□□□ 0.44
ATP2A1O14983 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ATP2A1O14983 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
ATP2A1O14983 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC17.79■□□□□ 0.44
ATP2A1O14983 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
ATP2A1O14983 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
ATP2A1O14983 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC17.79■□□□□ 0.44
ATP2A1O14983 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
ATP2A1O14983 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
ATP2A1O14983 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ATP2A1O14983 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
ATP2A1O14983 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ATP2A1O14983 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC17.79■□□□□ 0.44
ATP2A1O14983 ACTBP8-201ENST00000403258 1108 ntBASIC17.79■□□□□ 0.44
ATP2A1O14983 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
ATP2A1O14983 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC17.79■□□□□ 0.44
ATP2A1O14983 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
ATP2A1O14983 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
ATP2A1O14983 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms