Protein–RNA interactions for Protein: O00311

CDC7, Cell division cycle 7-related protein kinase, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7O00311 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
CDC7O00311 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CDC7O00311 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC15.36■□□□□ 0.05
CDC7O00311 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CDC7O00311 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC15.36■□□□□ 0.05
CDC7O00311 POR-201ENST00000394893 2532 ntTSL 5 BASIC15.36■□□□□ 0.05
CDC7O00311 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CDC7O00311 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
CDC7O00311 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
CDC7O00311 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CDC7O00311 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC15.36■□□□□ 0.05
CDC7O00311 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
CDC7O00311 WRB-204ENST00000398753 699 ntTSL 3 BASIC15.36■□□□□ 0.05
CDC7O00311 RAD18-204ENST00000418463 563 ntTSL 4 BASIC15.36■□□□□ 0.05
CDC7O00311 RAD18-205ENST00000421052 582 ntTSL 3 BASIC15.36■□□□□ 0.05
CDC7O00311 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC15.36■□□□□ 0.05
CDC7O00311 AC125807.1-201ENST00000483097 614 ntBASIC15.36■□□□□ 0.05
CDC7O00311 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC15.36■□□□□ 0.05
CDC7O00311 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC15.36■□□□□ 0.05
CDC7O00311 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC15.36■□□□□ 0.05
CDC7O00311 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
CDC7O00311 AP001160.2-201ENST00000596071 487 ntBASIC15.36■□□□□ 0.05
CDC7O00311 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC15.36■□□□□ 0.05
CDC7O00311 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC15.36■□□□□ 0.05
CDC7O00311 AF228730.6-201ENST00000641497 218 ntBASIC15.36■□□□□ 0.05
CDC7O00311 AC084121.3-201ENST00000641716 218 ntBASIC15.36■□□□□ 0.05
CDC7O00311 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CDC7O00311 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
CDC7O00311 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
CDC7O00311 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC15.36■□□□□ 0.05
CDC7O00311 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CDC7O00311 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
CDC7O00311 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC15.36■□□□□ 0.05
CDC7O00311 AC068418.2-201ENST00000577309 3703 ntBASIC15.36■□□□□ 0.05
CDC7O00311 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC15.36■□□□□ 0.05
CDC7O00311 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
CDC7O00311 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CDC7O00311 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CDC7O00311 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CDC7O00311 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC15.36■□□□□ 0.05
CDC7O00311 AC067930.6-201ENST00000623257 4947 ntBASIC15.36■□□□□ 0.05
CDC7O00311 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC15.36■□□□□ 0.05
CDC7O00311 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CDC7O00311 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
CDC7O00311 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
CDC7O00311 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CDC7O00311 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
CDC7O00311 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CDC7O00311 CICP11-201ENST00000434745 2827 ntBASIC15.35■□□□□ 0.05
CDC7O00311 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC15.35■□□□□ 0.05
CDC7O00311 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CDC7O00311 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CDC7O00311 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CDC7O00311 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC15.35■□□□□ 0.05
CDC7O00311 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CDC7O00311 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
CDC7O00311 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CDC7O00311 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
CDC7O00311 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CDC7O00311 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CDC7O00311 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CDC7O00311 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
CDC7O00311 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC15.35■□□□□ 0.05
CDC7O00311 KLF2P3-201ENST00000451977 1087 ntBASIC15.35■□□□□ 0.05
CDC7O00311 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC15.35■□□□□ 0.05
CDC7O00311 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC15.35■□□□□ 0.05
CDC7O00311 SLED1-202ENST00000512051 380 ntBASIC15.35■□□□□ 0.05
CDC7O00311 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CDC7O00311 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC15.35■□□□□ 0.05
CDC7O00311 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC15.35■□□□□ 0.05
CDC7O00311 AC025678.2-201ENST00000562061 970 ntBASIC15.35■□□□□ 0.05
CDC7O00311 AC051619.7-201ENST00000568314 623 ntBASIC15.35■□□□□ 0.05
CDC7O00311 LINC01115-203ENST00000606068 577 ntBASIC15.35■□□□□ 0.05
CDC7O00311 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC15.35■□□□□ 0.05
CDC7O00311 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC15.35■□□□□ 0.05
CDC7O00311 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC15.35■□□□□ 0.05
CDC7O00311 AC093028.1-201ENST00000622998 982 ntBASIC15.35■□□□□ 0.05
CDC7O00311 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
CDC7O00311 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC15.35■□□□□ 0.05
CDC7O00311 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CDC7O00311 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CDC7O00311 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CDC7O00311 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
CDC7O00311 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CDC7O00311 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CDC7O00311 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
CDC7O00311 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CDC7O00311 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CDC7O00311 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC15.35■□□□□ 0.05
CDC7O00311 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC15.35■□□□□ 0.05
CDC7O00311 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CDC7O00311 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CDC7O00311 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC15.35■□□□□ 0.05
CDC7O00311 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDC7O00311 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
CDC7O00311 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDC7O00311 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDC7O00311 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
CDC7O00311 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDC7O00311 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 75.1 ms