Protein–RNA interactions for Protein: A8K010

LINC00473, Putative transcriptional regulator encoded by LINC00473, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00473A8K010 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
LINC00473A8K010 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
LINC00473A8K010 RPS19-201ENST00000221975 500 ntTSL 3 BASIC12.75□□□□□ -0.37
LINC00473A8K010 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
LINC00473A8K010 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
LINC00473A8K010 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
LINC00473A8K010 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
LINC00473A8K010 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
LINC00473A8K010 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
LINC00473A8K010 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
LINC00473A8K010 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
LINC00473A8K010 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
LINC00473A8K010 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
LINC00473A8K010 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC12.75□□□□□ -0.37
LINC00473A8K010 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
LINC00473A8K010 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
LINC00473A8K010 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
LINC00473A8K010 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
LINC00473A8K010 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC12.75□□□□□ -0.37
LINC00473A8K010 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC12.75□□□□□ -0.37
LINC00473A8K010 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
LINC00473A8K010 TARDBPP1-201ENST00000442013 1203 ntBASIC12.75□□□□□ -0.37
LINC00473A8K010 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
LINC00473A8K010 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC12.75□□□□□ -0.37
LINC00473A8K010 AP000344.2-201ENST00000512987 629 ntBASIC12.75□□□□□ -0.37
LINC00473A8K010 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC12.75□□□□□ -0.37
LINC00473A8K010 AC026150.2-201ENST00000564693 1156 ntBASIC12.75□□□□□ -0.37
LINC00473A8K010 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC12.75□□□□□ -0.37
LINC00473A8K010 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC12.75□□□□□ -0.37
LINC00473A8K010 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
LINC00473A8K010 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC12.75□□□□□ -0.37
LINC00473A8K010 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
LINC00473A8K010 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC12.75□□□□□ -0.37
LINC00473A8K010 AC007967.4-201ENST00000614700 386 ntBASIC12.75□□□□□ -0.37
LINC00473A8K010 AC007686.3-201ENST00000619017 3487 ntBASIC12.75□□□□□ -0.37
LINC00473A8K010 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
LINC00473A8K010 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
LINC00473A8K010 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
LINC00473A8K010 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
LINC00473A8K010 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC12.75□□□□□ -0.37
LINC00473A8K010 AL009178.2-201ENST00000597278 2719 ntBASIC12.75□□□□□ -0.37
LINC00473A8K010 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
LINC00473A8K010 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LINC00473A8K010 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
LINC00473A8K010 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC12.74□□□□□ -0.37
LINC00473A8K010 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
LINC00473A8K010 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
LINC00473A8K010 ZBED1P1-201ENST00000502364 1930 ntBASIC12.74□□□□□ -0.37
LINC00473A8K010 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
LINC00473A8K010 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LINC00473A8K010 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LINC00473A8K010 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LINC00473A8K010 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
LINC00473A8K010 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
LINC00473A8K010 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
LINC00473A8K010 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC12.74□□□□□ -0.37
LINC00473A8K010 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LINC00473A8K010 MROH4P-201ENST00000431302 1578 ntBASIC12.74□□□□□ -0.37
LINC00473A8K010 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC12.74□□□□□ -0.37
LINC00473A8K010 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LINC00473A8K010 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LINC00473A8K010 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
LINC00473A8K010 KRT8P12-202ENST00000472924 1397 ntBASIC12.74□□□□□ -0.37
LINC00473A8K010 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
LINC00473A8K010 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
LINC00473A8K010 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
LINC00473A8K010 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
LINC00473A8K010 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LINC00473A8K010 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
LINC00473A8K010 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC12.74□□□□□ -0.37
LINC00473A8K010 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
LINC00473A8K010 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC12.74□□□□□ -0.37
LINC00473A8K010 MTND6P24-201ENST00000440466 518 ntBASIC12.74□□□□□ -0.37
LINC00473A8K010 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
LINC00473A8K010 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC12.74□□□□□ -0.37
LINC00473A8K010 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LINC00473A8K010 PTK7-212ENST00000476760 902 ntTSL 2 BASIC12.74□□□□□ -0.37
LINC00473A8K010 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
LINC00473A8K010 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
LINC00473A8K010 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC12.74□□□□□ -0.37
LINC00473A8K010 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
LINC00473A8K010 FGD5P1-202ENST00000614866 2498 ntBASIC12.74□□□□□ -0.37
LINC00473A8K010 AJ011931.1-201ENST00000618749 2492 ntBASIC12.74□□□□□ -0.37
LINC00473A8K010 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC12.74□□□□□ -0.37
LINC00473A8K010 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
LINC00473A8K010 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
LINC00473A8K010 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LINC00473A8K010 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LINC00473A8K010 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
LINC00473A8K010 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
LINC00473A8K010 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
LINC00473A8K010 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
LINC00473A8K010 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC12.74□□□□□ -0.37
LINC00473A8K010 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC12.74□□□□□ -0.37
LINC00473A8K010 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC12.74□□□□□ -0.37
LINC00473A8K010 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LINC00473A8K010 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
LINC00473A8K010 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LINC00473A8K010 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC12.74□□□□□ -0.37
LINC00473A8K010 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC12.73□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms