Protein–RNA interactions for Protein: A6NNA2

SRRM3, Serine/arginine repetitive matrix protein 3, humanhuman

Predicted RBP Predictions only

Length 597 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM3A6NNA2 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
SRRM3A6NNA2 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
SRRM3A6NNA2 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SRRM3A6NNA2 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SRRM3A6NNA2 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SRRM3A6NNA2 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SRRM3A6NNA2 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SRRM3A6NNA2 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
SRRM3A6NNA2 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
SRRM3A6NNA2 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
SRRM3A6NNA2 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
SRRM3A6NNA2 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SRRM3A6NNA2 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SRRM3A6NNA2 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SRRM3A6NNA2 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC16.29■□□□□ 0.2
SRRM3A6NNA2 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SRRM3A6NNA2 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SRRM3A6NNA2 AC005840.4-201ENST00000541242 2494 ntBASIC16.28■□□□□ 0.2
SRRM3A6NNA2 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
SRRM3A6NNA2 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC16.28■□□□□ 0.2
SRRM3A6NNA2 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
SRRM3A6NNA2 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
SRRM3A6NNA2 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC16.28■□□□□ 0.2
SRRM3A6NNA2 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SRRM3A6NNA2 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
SRRM3A6NNA2 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SRRM3A6NNA2 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
SRRM3A6NNA2 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC16.28■□□□□ 0.2
SRRM3A6NNA2 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
SRRM3A6NNA2 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SRRM3A6NNA2 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
SRRM3A6NNA2 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SRRM3A6NNA2 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC16.28■□□□□ 0.2
SRRM3A6NNA2 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC16.28■□□□□ 0.2
SRRM3A6NNA2 PARP8-206ENST00000503665 572 ntTSL 4 BASIC16.28■□□□□ 0.2
SRRM3A6NNA2 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC16.28■□□□□ 0.2
SRRM3A6NNA2 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC16.28■□□□□ 0.2
SRRM3A6NNA2 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC16.28■□□□□ 0.2
SRRM3A6NNA2 NAA38-206ENST00000576384 424 ntTSL 2 BASIC16.28■□□□□ 0.2
SRRM3A6NNA2 CYB561-216ENST00000582297 897 ntTSL 3 BASIC16.28■□□□□ 0.2
SRRM3A6NNA2 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC16.28■□□□□ 0.2
SRRM3A6NNA2 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC16.28■□□□□ 0.2
SRRM3A6NNA2 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC16.28■□□□□ 0.2
SRRM3A6NNA2 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC16.28■□□□□ 0.2
SRRM3A6NNA2 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC16.28■□□□□ 0.2
SRRM3A6NNA2 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
SRRM3A6NNA2 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SRRM3A6NNA2 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SRRM3A6NNA2 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
SRRM3A6NNA2 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SRRM3A6NNA2 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SRRM3A6NNA2 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SRRM3A6NNA2 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
SRRM3A6NNA2 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC16.27■□□□□ 0.2
SRRM3A6NNA2 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC16.27■□□□□ 0.2
SRRM3A6NNA2 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC16.27■□□□□ 0.2
SRRM3A6NNA2 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SRRM3A6NNA2 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SRRM3A6NNA2 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SRRM3A6NNA2 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SRRM3A6NNA2 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SRRM3A6NNA2 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SRRM3A6NNA2 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SRRM3A6NNA2 CALY-202ENST00000368555 783 ntTSL 2 BASIC16.27■□□□□ 0.2
SRRM3A6NNA2 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
SRRM3A6NNA2 MRPS18AP1-201ENST00000414458 589 ntBASIC16.27■□□□□ 0.2
SRRM3A6NNA2 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC16.27■□□□□ 0.2
SRRM3A6NNA2 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SRRM3A6NNA2 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC16.27■□□□□ 0.2
SRRM3A6NNA2 GALT-202ENST00000450095 1280 ntTSL 2 BASIC16.27■□□□□ 0.2
SRRM3A6NNA2 AL513480.1-201ENST00000451731 511 ntBASIC16.27■□□□□ 0.2
SRRM3A6NNA2 RN7SL589P-201ENST00000481268 310 ntBASIC16.27■□□□□ 0.2
SRRM3A6NNA2 AC004890.2-204ENST00000481968 304 ntBASIC16.27■□□□□ 0.2
SRRM3A6NNA2 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
SRRM3A6NNA2 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC16.27■□□□□ 0.2
SRRM3A6NNA2 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC16.27■□□□□ 0.2
SRRM3A6NNA2 INO80E-210ENST00000567705 880 ntTSL 3 BASIC16.27■□□□□ 0.2
SRRM3A6NNA2 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC16.27■□□□□ 0.2
SRRM3A6NNA2 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC16.27■□□□□ 0.2
SRRM3A6NNA2 AC099522.2-201ENST00000607001 744 ntBASIC16.27■□□□□ 0.2
SRRM3A6NNA2 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC16.27■□□□□ 0.2
SRRM3A6NNA2 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC16.27■□□□□ 0.2
SRRM3A6NNA2 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC16.27■□□□□ 0.2
SRRM3A6NNA2 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
SRRM3A6NNA2 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
SRRM3A6NNA2 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
SRRM3A6NNA2 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC16.27■□□□□ 0.19
SRRM3A6NNA2 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC16.27■□□□□ 0.19
SRRM3A6NNA2 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
SRRM3A6NNA2 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
SRRM3A6NNA2 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
SRRM3A6NNA2 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC16.27■□□□□ 0.19
SRRM3A6NNA2 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC16.27■□□□□ 0.19
SRRM3A6NNA2 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
SRRM3A6NNA2 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
SRRM3A6NNA2 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
SRRM3A6NNA2 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SRRM3A6NNA2 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SRRM3A6NNA2 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC16.26■□□□□ 0.19
SRRM3A6NNA2 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 56.8 ms