Protein–RNA interactions for Protein: A2VCL2

CCDC162P, Coiled-coil domain-containing protein 162, humanhuman

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC162PA2VCL2 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC15.69■□□□□ 0.1
CCDC162PA2VCL2 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC162PA2VCL2 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC162PA2VCL2 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC15.69■□□□□ 0.1
CCDC162PA2VCL2 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC162PA2VCL2 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC162PA2VCL2 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC162PA2VCL2 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC162PA2VCL2 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
CCDC162PA2VCL2 AC087499.5-201ENST00000452760 1342 ntBASIC15.68■□□□□ 0.1
CCDC162PA2VCL2 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC162PA2VCL2 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC162PA2VCL2 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC15.68■□□□□ 0.1
CCDC162PA2VCL2 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC162PA2VCL2 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC162PA2VCL2 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC15.68■□□□□ 0.1
CCDC162PA2VCL2 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
CCDC162PA2VCL2 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
CCDC162PA2VCL2 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC162PA2VCL2 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC162PA2VCL2 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
CCDC162PA2VCL2 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC15.68■□□□□ 0.1
CCDC162PA2VCL2 AC006486.2-201ENST00000624246 2199 ntBASIC15.68■□□□□ 0.1
CCDC162PA2VCL2 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC15.68■□□□□ 0.1
CCDC162PA2VCL2 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC162PA2VCL2 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC162PA2VCL2 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC162PA2VCL2 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC162PA2VCL2 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC162PA2VCL2 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC15.68■□□□□ 0.1
CCDC162PA2VCL2 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC15.68■□□□□ 0.1
CCDC162PA2VCL2 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC162PA2VCL2 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC15.68■□□□□ 0.1
CCDC162PA2VCL2 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC15.68■□□□□ 0.1
CCDC162PA2VCL2 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC15.68■□□□□ 0.1
CCDC162PA2VCL2 SLED1-202ENST00000512051 380 ntBASIC15.68■□□□□ 0.1
CCDC162PA2VCL2 IGHV3-42-201ENST00000520410 361 ntBASIC15.68■□□□□ 0.1
CCDC162PA2VCL2 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC15.68■□□□□ 0.1
CCDC162PA2VCL2 AC044860.1-202ENST00000559481 777 ntBASIC15.68■□□□□ 0.1
CCDC162PA2VCL2 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
CCDC162PA2VCL2 AC106028.4-201ENST00000614509 607 ntBASIC15.68■□□□□ 0.1
CCDC162PA2VCL2 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC15.68■□□□□ 0.1
CCDC162PA2VCL2 RAB34-223ENST00000636154 730 ntTSL 2 BASIC15.68■□□□□ 0.1
CCDC162PA2VCL2 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC162PA2VCL2 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC162PA2VCL2 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC15.68■□□□□ 0.1
CCDC162PA2VCL2 R3HDM2P2-201ENST00000401880 2116 ntBASIC15.68■□□□□ 0.1
CCDC162PA2VCL2 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC162PA2VCL2 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC15.68■□□□□ 0.1
CCDC162PA2VCL2 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
CCDC162PA2VCL2 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
CCDC162PA2VCL2 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC15.68■□□□□ 0.1
CCDC162PA2VCL2 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC15.68■□□□□ 0.1
CCDC162PA2VCL2 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC15.68■□□□□ 0.1
CCDC162PA2VCL2 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC162PA2VCL2 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC15.67■□□□□ 0.1
CCDC162PA2VCL2 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC162PA2VCL2 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC15.67■□□□□ 0.1
CCDC162PA2VCL2 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC162PA2VCL2 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC15.67■□□□□ 0.1
CCDC162PA2VCL2 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC162PA2VCL2 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC15.67■□□□□ 0.1
CCDC162PA2VCL2 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
CCDC162PA2VCL2 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC162PA2VCL2 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC162PA2VCL2 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC15.67■□□□□ 0.1
CCDC162PA2VCL2 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC162PA2VCL2 RPL13P2-201ENST00000440687 659 ntBASIC15.67■□□□□ 0.1
CCDC162PA2VCL2 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC15.67■□□□□ 0.1
CCDC162PA2VCL2 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC15.67■□□□□ 0.1
CCDC162PA2VCL2 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC15.67■□□□□ 0.1
CCDC162PA2VCL2 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC162PA2VCL2 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC15.67■□□□□ 0.1
CCDC162PA2VCL2 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC15.67■□□□□ 0.1
CCDC162PA2VCL2 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC15.67■□□□□ 0.1
CCDC162PA2VCL2 AC093512.1-201ENST00000617969 520 ntBASIC15.67■□□□□ 0.1
CCDC162PA2VCL2 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
CCDC162PA2VCL2 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC162PA2VCL2 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC162PA2VCL2 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC15.67■□□□□ 0.1
CCDC162PA2VCL2 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC162PA2VCL2 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
CCDC162PA2VCL2 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC15.67■□□□□ 0.1
CCDC162PA2VCL2 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC15.67■□□□□ 0.1
CCDC162PA2VCL2 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC162PA2VCL2 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC162PA2VCL2 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC15.67■□□□□ 0.1
CCDC162PA2VCL2 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC162PA2VCL2 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
CCDC162PA2VCL2 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC162PA2VCL2 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC15.66■□□□□ 0.1
CCDC162PA2VCL2 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC162PA2VCL2 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC15.66■□□□□ 0.1
CCDC162PA2VCL2 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC15.66■□□□□ 0.1
CCDC162PA2VCL2 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC162PA2VCL2 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC162PA2VCL2 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC162PA2VCL2 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
CCDC162PA2VCL2 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC162PA2VCL2 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 57.3 ms