Protein–RNA interactions for Protein: A2A3K4

PTPDC1, Protein tyrosine phosphatase domain-containing protein 1, humanhuman

Predictions only

Length 754 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1A2A3K4 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC18.4■□□□□ 0.54
PTPDC1A2A3K4 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PTPDC1A2A3K4 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PTPDC1A2A3K4 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC18.4■□□□□ 0.54
PTPDC1A2A3K4 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC18.4■□□□□ 0.54
PTPDC1A2A3K4 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC18.4■□□□□ 0.54
PTPDC1A2A3K4 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC18.4■□□□□ 0.54
PTPDC1A2A3K4 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC18.4■□□□□ 0.54
PTPDC1A2A3K4 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC18.4■□□□□ 0.54
PTPDC1A2A3K4 SRD5A3P1-201ENST00000603021 949 ntBASIC18.4■□□□□ 0.54
PTPDC1A2A3K4 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
PTPDC1A2A3K4 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PTPDC1A2A3K4 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
PTPDC1A2A3K4 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PTPDC1A2A3K4 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
PTPDC1A2A3K4 AP002414.2-201ENST00000591780 3365 ntBASIC18.4■□□□□ 0.54
PTPDC1A2A3K4 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC18.4■□□□□ 0.54
PTPDC1A2A3K4 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC18.4■□□□□ 0.54
PTPDC1A2A3K4 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PTPDC1A2A3K4 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC18.4■□□□□ 0.54
PTPDC1A2A3K4 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC18.4■□□□□ 0.54
PTPDC1A2A3K4 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
PTPDC1A2A3K4 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC18.4■□□□□ 0.54
PTPDC1A2A3K4 OVCH1-AS1-204ENST00000641955 5529 ntBASIC18.39■□□□□ 0.54
PTPDC1A2A3K4 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
PTPDC1A2A3K4 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.54
PTPDC1A2A3K4 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PTPDC1A2A3K4 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC18.39■□□□□ 0.53
PTPDC1A2A3K4 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PTPDC1A2A3K4 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PTPDC1A2A3K4 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PTPDC1A2A3K4 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
PTPDC1A2A3K4 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PTPDC1A2A3K4 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
PTPDC1A2A3K4 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC18.39■□□□□ 0.53
PTPDC1A2A3K4 FO393414.2-201ENST00000405153 598 ntBASIC18.39■□□□□ 0.53
PTPDC1A2A3K4 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC18.39■□□□□ 0.53
PTPDC1A2A3K4 PTK7-212ENST00000476760 902 ntTSL 2 BASIC18.39■□□□□ 0.53
PTPDC1A2A3K4 CD81-207ENST00000481687 890 ntTSL 2 BASIC18.39■□□□□ 0.53
PTPDC1A2A3K4 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC18.39■□□□□ 0.53
PTPDC1A2A3K4 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC18.39■□□□□ 0.53
PTPDC1A2A3K4 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PTPDC1A2A3K4 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC18.39■□□□□ 0.53
PTPDC1A2A3K4 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC18.39■□□□□ 0.53
PTPDC1A2A3K4 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
PTPDC1A2A3K4 HADH-212ENST00000638621 741 ntTSL 5 BASIC18.39■□□□□ 0.53
PTPDC1A2A3K4 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PTPDC1A2A3K4 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PTPDC1A2A3K4 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
PTPDC1A2A3K4 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
PTPDC1A2A3K4 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC18.39■□□□□ 0.53
PTPDC1A2A3K4 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
PTPDC1A2A3K4 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC18.39■□□□□ 0.53
PTPDC1A2A3K4 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
PTPDC1A2A3K4 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PTPDC1A2A3K4 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PTPDC1A2A3K4 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PTPDC1A2A3K4 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC18.38■□□□□ 0.53
PTPDC1A2A3K4 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PTPDC1A2A3K4 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PTPDC1A2A3K4 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC18.38■□□□□ 0.53
PTPDC1A2A3K4 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PTPDC1A2A3K4 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC18.38■□□□□ 0.53
PTPDC1A2A3K4 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC18.38■□□□□ 0.53
PTPDC1A2A3K4 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC18.38■□□□□ 0.53
PTPDC1A2A3K4 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
PTPDC1A2A3K4 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PTPDC1A2A3K4 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC18.38■□□□□ 0.53
PTPDC1A2A3K4 AC087499.6-201ENST00000411576 835 ntBASIC18.38■□□□□ 0.53
PTPDC1A2A3K4 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC18.38■□□□□ 0.53
PTPDC1A2A3K4 COX5BP8-201ENST00000416911 349 ntBASIC18.38■□□□□ 0.53
PTPDC1A2A3K4 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC18.38■□□□□ 0.53
PTPDC1A2A3K4 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC18.38■□□□□ 0.53
PTPDC1A2A3K4 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC18.38■□□□□ 0.53
PTPDC1A2A3K4 AC093004.1-201ENST00000508850 424 ntBASIC18.38■□□□□ 0.53
PTPDC1A2A3K4 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC18.38■□□□□ 0.53
PTPDC1A2A3K4 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC18.38■□□□□ 0.53
PTPDC1A2A3K4 5S_rRNA.22-201ENST00000614916 106 ntBASIC18.38■□□□□ 0.53
PTPDC1A2A3K4 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC18.38■□□□□ 0.53
PTPDC1A2A3K4 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
PTPDC1A2A3K4 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PTPDC1A2A3K4 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC18.38■□□□□ 0.53
PTPDC1A2A3K4 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PTPDC1A2A3K4 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PTPDC1A2A3K4 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC18.38■□□□□ 0.53
PTPDC1A2A3K4 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
PTPDC1A2A3K4 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC18.38■□□□□ 0.53
PTPDC1A2A3K4 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
PTPDC1A2A3K4 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PTPDC1A2A3K4 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PTPDC1A2A3K4 CELP-203ENST00000624767 2414 ntTSL 5 BASIC18.38■□□□□ 0.53
PTPDC1A2A3K4 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PTPDC1A2A3K4 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC18.37■□□□□ 0.53
PTPDC1A2A3K4 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC18.37■□□□□ 0.53
PTPDC1A2A3K4 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC18.37■□□□□ 0.53
PTPDC1A2A3K4 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC18.37■□□□□ 0.53
PTPDC1A2A3K4 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PTPDC1A2A3K4 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
PTPDC1A2A3K4 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
PTPDC1A2A3K4 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 69.1 ms