Protein–RNA interactions for Protein: A0A1W2PRF3

Uncharacterized protein, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
A0A1W2PRF3 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
A0A1W2PRF3 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
A0A1W2PRF3 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC12.94□□□□□ -0.34
A0A1W2PRF3 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
A0A1W2PRF3 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
A0A1W2PRF3 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
A0A1W2PRF3 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC12.93□□□□□ -0.34
A0A1W2PRF3 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
A0A1W2PRF3 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
A0A1W2PRF3 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC12.93□□□□□ -0.34
A0A1W2PRF3 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
A0A1W2PRF3 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
A0A1W2PRF3 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC12.93□□□□□ -0.34
A0A1W2PRF3 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
A0A1W2PRF3 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
A0A1W2PRF3 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
A0A1W2PRF3 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
A0A1W2PRF3 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC12.93□□□□□ -0.34
A0A1W2PRF3 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
A0A1W2PRF3 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
A0A1W2PRF3 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
A0A1W2PRF3 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
A0A1W2PRF3 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC12.93□□□□□ -0.34
A0A1W2PRF3 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
A0A1W2PRF3 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
A0A1W2PRF3 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC12.93□□□□□ -0.34
A0A1W2PRF3 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
A0A1W2PRF3 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
A0A1W2PRF3 EDF1-203ENST00000371649 790 ntTSL 2 BASIC12.93□□□□□ -0.34
A0A1W2PRF3 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
A0A1W2PRF3 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC12.93□□□□□ -0.34
A0A1W2PRF3 TARDBPP1-201ENST00000442013 1203 ntBASIC12.93□□□□□ -0.34
A0A1W2PRF3 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC12.93□□□□□ -0.34
A0A1W2PRF3 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC12.93□□□□□ -0.34
A0A1W2PRF3 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
A0A1W2PRF3 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC12.93□□□□□ -0.34
A0A1W2PRF3 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC12.93□□□□□ -0.34
A0A1W2PRF3 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC12.93□□□□□ -0.34
A0A1W2PRF3 SRD5A3P1-201ENST00000603021 949 ntBASIC12.93□□□□□ -0.34
A0A1W2PRF3 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
A0A1W2PRF3 AC074044.1-201ENST00000609673 707 ntBASIC12.93□□□□□ -0.34
A0A1W2PRF3 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC12.93□□□□□ -0.34
A0A1W2PRF3 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC12.93□□□□□ -0.34
A0A1W2PRF3 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
A0A1W2PRF3 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC12.93□□□□□ -0.34
A0A1W2PRF3 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
A0A1W2PRF3 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
A0A1W2PRF3 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
A0A1W2PRF3 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
A0A1W2PRF3 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
A0A1W2PRF3 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
A0A1W2PRF3 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
A0A1W2PRF3 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
A0A1W2PRF3 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
A0A1W2PRF3 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
A0A1W2PRF3 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
A0A1W2PRF3 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC12.93□□□□□ -0.34
A0A1W2PRF3 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
A0A1W2PRF3 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
A0A1W2PRF3 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
A0A1W2PRF3 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
A0A1W2PRF3 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
A0A1W2PRF3 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
A0A1W2PRF3 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
A0A1W2PRF3 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
A0A1W2PRF3 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
A0A1W2PRF3 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
A0A1W2PRF3 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
A0A1W2PRF3 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
A0A1W2PRF3 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC12.92□□□□□ -0.34
A0A1W2PRF3 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
A0A1W2PRF3 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC12.92□□□□□ -0.34
A0A1W2PRF3 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
A0A1W2PRF3 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
A0A1W2PRF3 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
A0A1W2PRF3 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
A0A1W2PRF3 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
A0A1W2PRF3 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
A0A1W2PRF3 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
A0A1W2PRF3 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
A0A1W2PRF3 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
A0A1W2PRF3 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
A0A1W2PRF3 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC12.92□□□□□ -0.34
A0A1W2PRF3 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC12.92□□□□□ -0.34
A0A1W2PRF3 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
A0A1W2PRF3 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
A0A1W2PRF3 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC12.92□□□□□ -0.34
A0A1W2PRF3 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
A0A1W2PRF3 PIN1P1-201ENST00000412108 996 ntBASIC12.92□□□□□ -0.34
A0A1W2PRF3 AC114501.2-201ENST00000439631 535 ntBASIC12.92□□□□□ -0.34
A0A1W2PRF3 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
A0A1W2PRF3 CD81-207ENST00000481687 890 ntTSL 2 BASIC12.92□□□□□ -0.34
A0A1W2PRF3 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC12.92□□□□□ -0.34
A0A1W2PRF3 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
A0A1W2PRF3 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
A0A1W2PRF3 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC12.92□□□□□ -0.34
A0A1W2PRF3 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC12.92□□□□□ -0.34
A0A1W2PRF3 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC12.92□□□□□ -0.34
A0A1W2PRF3 AC023310.3-201ENST00000557027 670 ntBASIC12.92□□□□□ -0.34
A0A1W2PRF3 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC12.92□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms