Protein–RNA interactions for Protein: A0A0B4J249

TRAV5, T-cell receptor alpha variable 5 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5A0A0B4J249 AC004987.2-201ENST00000395959 1148 ntBASIC12.22□□□□□ -0.45
TRAV5A0A0B4J249 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC12.22□□□□□ -0.45
TRAV5A0A0B4J249 AL645939.2-201ENST00000427340 991 ntBASIC12.22□□□□□ -0.45
TRAV5A0A0B4J249 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC12.22□□□□□ -0.45
TRAV5A0A0B4J249 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC12.22□□□□□ -0.45
TRAV5A0A0B4J249 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TRAV5A0A0B4J249 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
TRAV5A0A0B4J249 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC12.22□□□□□ -0.45
TRAV5A0A0B4J249 AC024267.1-201ENST00000582320 895 ntBASIC12.22□□□□□ -0.45
TRAV5A0A0B4J249 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TRAV5A0A0B4J249 AL773604.1-201ENST00000617417 272 ntBASIC12.22□□□□□ -0.45
TRAV5A0A0B4J249 AL691432.3-201ENST00000621860 400 ntBASIC12.22□□□□□ -0.45
TRAV5A0A0B4J249 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC12.22□□□□□ -0.45
TRAV5A0A0B4J249 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TRAV5A0A0B4J249 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TRAV5A0A0B4J249 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
TRAV5A0A0B4J249 INTS4P1-203ENST00000641008 3683 ntBASIC12.22□□□□□ -0.45
TRAV5A0A0B4J249 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TRAV5A0A0B4J249 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TRAV5A0A0B4J249 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
TRAV5A0A0B4J249 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TRAV5A0A0B4J249 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC12.22□□□□□ -0.45
TRAV5A0A0B4J249 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC12.22□□□□□ -0.45
TRAV5A0A0B4J249 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TRAV5A0A0B4J249 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TRAV5A0A0B4J249 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TRAV5A0A0B4J249 CICP4-201ENST00000447359 2812 ntBASIC12.22□□□□□ -0.45
TRAV5A0A0B4J249 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC12.22□□□□□ -0.45
TRAV5A0A0B4J249 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
TRAV5A0A0B4J249 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TRAV5A0A0B4J249 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TRAV5A0A0B4J249 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TRAV5A0A0B4J249 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
TRAV5A0A0B4J249 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
TRAV5A0A0B4J249 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
TRAV5A0A0B4J249 MROH4P-201ENST00000431302 1578 ntBASIC12.22□□□□□ -0.45
TRAV5A0A0B4J249 FOXO1B-201ENST00000504678 1527 ntBASIC12.21□□□□□ -0.45
TRAV5A0A0B4J249 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC12.21□□□□□ -0.45
TRAV5A0A0B4J249 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
TRAV5A0A0B4J249 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
TRAV5A0A0B4J249 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
TRAV5A0A0B4J249 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
TRAV5A0A0B4J249 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
TRAV5A0A0B4J249 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
TRAV5A0A0B4J249 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
TRAV5A0A0B4J249 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
TRAV5A0A0B4J249 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
TRAV5A0A0B4J249 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
TRAV5A0A0B4J249 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC12.21□□□□□ -0.45
TRAV5A0A0B4J249 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
TRAV5A0A0B4J249 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC12.21□□□□□ -0.45
TRAV5A0A0B4J249 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC12.21□□□□□ -0.45
TRAV5A0A0B4J249 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC12.21□□□□□ -0.45
TRAV5A0A0B4J249 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
TRAV5A0A0B4J249 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
TRAV5A0A0B4J249 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
TRAV5A0A0B4J249 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
TRAV5A0A0B4J249 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC12.21□□□□□ -0.45
TRAV5A0A0B4J249 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC12.21□□□□□ -0.45
TRAV5A0A0B4J249 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
TRAV5A0A0B4J249 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC12.21□□□□□ -0.45
TRAV5A0A0B4J249 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC12.21□□□□□ -0.45
TRAV5A0A0B4J249 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
TRAV5A0A0B4J249 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
TRAV5A0A0B4J249 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC12.21□□□□□ -0.45
TRAV5A0A0B4J249 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
TRAV5A0A0B4J249 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC12.21□□□□□ -0.45
TRAV5A0A0B4J249 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC12.21□□□□□ -0.45
TRAV5A0A0B4J249 KRT18P56-201ENST00000507275 550 ntBASIC12.21□□□□□ -0.45
TRAV5A0A0B4J249 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
TRAV5A0A0B4J249 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC12.21□□□□□ -0.45
TRAV5A0A0B4J249 MAL2-202ENST00000531508 892 ntTSL 3 BASIC12.21□□□□□ -0.45
TRAV5A0A0B4J249 KRT19P2-202ENST00000557173 1012 ntBASIC12.21□□□□□ -0.45
TRAV5A0A0B4J249 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC12.21□□□□□ -0.45
TRAV5A0A0B4J249 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC12.21□□□□□ -0.45
TRAV5A0A0B4J249 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
TRAV5A0A0B4J249 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC12.21□□□□□ -0.45
TRAV5A0A0B4J249 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC12.21□□□□□ -0.45
TRAV5A0A0B4J249 CALM3-211ENST00000598871 561 ntTSL 4 BASIC12.21□□□□□ -0.45
TRAV5A0A0B4J249 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
TRAV5A0A0B4J249 AL450472.2-201ENST00000603663 1156 ntBASIC12.21□□□□□ -0.45
TRAV5A0A0B4J249 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC12.21□□□□□ -0.45
TRAV5A0A0B4J249 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
TRAV5A0A0B4J249 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
TRAV5A0A0B4J249 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC12.21□□□□□ -0.45
TRAV5A0A0B4J249 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
TRAV5A0A0B4J249 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC12.21□□□□□ -0.45
TRAV5A0A0B4J249 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC12.21□□□□□ -0.45
TRAV5A0A0B4J249 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
TRAV5A0A0B4J249 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
TRAV5A0A0B4J249 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
TRAV5A0A0B4J249 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
TRAV5A0A0B4J249 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
TRAV5A0A0B4J249 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
TRAV5A0A0B4J249 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC12.21□□□□□ -0.46
TRAV5A0A0B4J249 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC12.21□□□□□ -0.46
TRAV5A0A0B4J249 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
TRAV5A0A0B4J249 ZBED1P1-201ENST00000502364 1930 ntBASIC12.21□□□□□ -0.46
TRAV5A0A0B4J249 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
TRAV5A0A0B4J249 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC12.21□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 55.1 ms