Protein–RNA interactions for Protein: A0A075B6X5

TRAV18, T-cell receptor alpha variable 18 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV18A0A075B6X5 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC13.53□□□□□ -0.24
TRAV18A0A075B6X5 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
TRAV18A0A075B6X5 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC13.53□□□□□ -0.24
TRAV18A0A075B6X5 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRAV18A0A075B6X5 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
TRAV18A0A075B6X5 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRAV18A0A075B6X5 CICP14-201ENST00000629111 2732 ntBASIC13.53□□□□□ -0.24
TRAV18A0A075B6X5 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRAV18A0A075B6X5 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC13.53□□□□□ -0.24
TRAV18A0A075B6X5 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRAV18A0A075B6X5 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
TRAV18A0A075B6X5 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRAV18A0A075B6X5 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
TRAV18A0A075B6X5 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
TRAV18A0A075B6X5 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC13.53□□□□□ -0.24
TRAV18A0A075B6X5 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRAV18A0A075B6X5 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC13.52□□□□□ -0.24
TRAV18A0A075B6X5 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.24
TRAV18A0A075B6X5 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
TRAV18A0A075B6X5 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC13.52□□□□□ -0.24
TRAV18A0A075B6X5 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
TRAV18A0A075B6X5 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
TRAV18A0A075B6X5 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
TRAV18A0A075B6X5 PPP1R26P4-201ENST00000619065 3527 ntBASIC13.52□□□□□ -0.24
TRAV18A0A075B6X5 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
TRAV18A0A075B6X5 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
TRAV18A0A075B6X5 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
TRAV18A0A075B6X5 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
TRAV18A0A075B6X5 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
TRAV18A0A075B6X5 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
TRAV18A0A075B6X5 LINC01230-201ENST00000625222 3017 ntBASIC13.52□□□□□ -0.24
TRAV18A0A075B6X5 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
TRAV18A0A075B6X5 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
TRAV18A0A075B6X5 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
TRAV18A0A075B6X5 DDT-204ENST00000404092 805 ntTSL 3 BASIC13.52□□□□□ -0.25
TRAV18A0A075B6X5 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
TRAV18A0A075B6X5 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
TRAV18A0A075B6X5 PRYP6-201ENST00000514804 343 ntBASIC13.52□□□□□ -0.25
TRAV18A0A075B6X5 PAM16-215ENST00000577031 548 ntTSL 4 BASIC13.52□□□□□ -0.25
TRAV18A0A075B6X5 MIR4751-201ENST00000578027 74 ntBASIC13.52□□□□□ -0.25
TRAV18A0A075B6X5 CD7-202ENST00000578509 925 ntTSL 3 BASIC13.52□□□□□ -0.25
TRAV18A0A075B6X5 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC13.52□□□□□ -0.25
TRAV18A0A075B6X5 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
TRAV18A0A075B6X5 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
TRAV18A0A075B6X5 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC13.52□□□□□ -0.25
TRAV18A0A075B6X5 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TRAV18A0A075B6X5 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TRAV18A0A075B6X5 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
TRAV18A0A075B6X5 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC13.52□□□□□ -0.25
TRAV18A0A075B6X5 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC13.52□□□□□ -0.25
TRAV18A0A075B6X5 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TRAV18A0A075B6X5 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TRAV18A0A075B6X5 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
TRAV18A0A075B6X5 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC13.52□□□□□ -0.25
TRAV18A0A075B6X5 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
TRAV18A0A075B6X5 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TRAV18A0A075B6X5 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
TRAV18A0A075B6X5 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TRAV18A0A075B6X5 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
TRAV18A0A075B6X5 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
TRAV18A0A075B6X5 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRAV18A0A075B6X5 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRAV18A0A075B6X5 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRAV18A0A075B6X5 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC13.51□□□□□ -0.25
TRAV18A0A075B6X5 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRAV18A0A075B6X5 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC13.51□□□□□ -0.25
TRAV18A0A075B6X5 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRAV18A0A075B6X5 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRAV18A0A075B6X5 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRAV18A0A075B6X5 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
TRAV18A0A075B6X5 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC13.51□□□□□ -0.25
TRAV18A0A075B6X5 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC13.51□□□□□ -0.25
TRAV18A0A075B6X5 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRAV18A0A075B6X5 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
TRAV18A0A075B6X5 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRAV18A0A075B6X5 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
TRAV18A0A075B6X5 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC13.51□□□□□ -0.25
TRAV18A0A075B6X5 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC13.51□□□□□ -0.25
TRAV18A0A075B6X5 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC13.51□□□□□ -0.25
TRAV18A0A075B6X5 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
TRAV18A0A075B6X5 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC13.51□□□□□ -0.25
TRAV18A0A075B6X5 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
TRAV18A0A075B6X5 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
TRAV18A0A075B6X5 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRAV18A0A075B6X5 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
TRAV18A0A075B6X5 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRAV18A0A075B6X5 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
TRAV18A0A075B6X5 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC13.51□□□□□ -0.25
TRAV18A0A075B6X5 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRAV18A0A075B6X5 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC13.51□□□□□ -0.25
TRAV18A0A075B6X5 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC13.51□□□□□ -0.25
TRAV18A0A075B6X5 CENPM-204ENST00000402420 688 ntTSL 5 BASIC13.51□□□□□ -0.25
TRAV18A0A075B6X5 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC13.51□□□□□ -0.25
TRAV18A0A075B6X5 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC13.51□□□□□ -0.25
TRAV18A0A075B6X5 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC13.51□□□□□ -0.25
TRAV18A0A075B6X5 PRSS29P-201ENST00000440800 595 ntBASIC13.51□□□□□ -0.25
TRAV18A0A075B6X5 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC13.51□□□□□ -0.25
TRAV18A0A075B6X5 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC13.51□□□□□ -0.25
TRAV18A0A075B6X5 RNPS1P1-201ENST00000507437 918 ntBASIC13.51□□□□□ -0.25
TRAV18A0A075B6X5 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC13.51□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 66.9 ms