Protein–RNA interactions for Protein: Q9Y5U5

TNFRSF18, Tumor necrosis factor receptor superfamily member 18, humanhuman

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF18Q9Y5U5 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC11.51□□□□□ -0.57
TNFRSF18Q9Y5U5 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
TNFRSF18Q9Y5U5 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
TNFRSF18Q9Y5U5 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
TNFRSF18Q9Y5U5 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
TNFRSF18Q9Y5U5 NPHP3-ACAD11-201ENST00000471702 7784 ntTSL 2 BASIC11.51□□□□□ -0.57
TNFRSF18Q9Y5U5 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
TNFRSF18Q9Y5U5 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
TNFRSF18Q9Y5U5 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
TNFRSF18Q9Y5U5 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC11.51□□□□□ -0.57
TNFRSF18Q9Y5U5 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC11.51□□□□□ -0.57
TNFRSF18Q9Y5U5 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC11.51□□□□□ -0.57
TNFRSF18Q9Y5U5 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC11.51□□□□□ -0.57
TNFRSF18Q9Y5U5 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
TNFRSF18Q9Y5U5 PPP2R5E-201ENST00000337537 6659 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
TNFRSF18Q9Y5U5 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
TNFRSF18Q9Y5U5 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC11.51□□□□□ -0.57
TNFRSF18Q9Y5U5 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
TNFRSF18Q9Y5U5 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
TNFRSF18Q9Y5U5 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
TNFRSF18Q9Y5U5 SSR4P1-203ENST00000599569 2260 ntBASIC11.51□□□□□ -0.57
TNFRSF18Q9Y5U5 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
TNFRSF18Q9Y5U5 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
TNFRSF18Q9Y5U5 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
TNFRSF18Q9Y5U5 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
TNFRSF18Q9Y5U5 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
TNFRSF18Q9Y5U5 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
TNFRSF18Q9Y5U5 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC11.51□□□□□ -0.57
TNFRSF18Q9Y5U5 HMGA1P7-201ENST00000406908 502 ntBASIC11.51□□□□□ -0.57
TNFRSF18Q9Y5U5 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
TNFRSF18Q9Y5U5 UPF3AP3-201ENST00000420996 769 ntBASIC11.51□□□□□ -0.57
TNFRSF18Q9Y5U5 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC11.51□□□□□ -0.57
TNFRSF18Q9Y5U5 AC245100.5-201ENST00000452108 331 ntBASIC11.51□□□□□ -0.57
TNFRSF18Q9Y5U5 CD63-210ENST00000550776 870 ntTSL 5 BASIC11.51□□□□□ -0.57
TNFRSF18Q9Y5U5 CIPC-205ENST00000555437 566 ntTSL 3 BASIC11.51□□□□□ -0.57
TNFRSF18Q9Y5U5 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC11.51□□□□□ -0.57
TNFRSF18Q9Y5U5 AC004877.2-201ENST00000623941 599 ntBASIC11.51□□□□□ -0.57
TNFRSF18Q9Y5U5 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC11.51□□□□□ -0.57
TNFRSF18Q9Y5U5 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
TNFRSF18Q9Y5U5 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
TNFRSF18Q9Y5U5 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
TNFRSF18Q9Y5U5 BCAR1-209ENST00000546196 1340 ntBASIC11.51□□□□□ -0.57
TNFRSF18Q9Y5U5 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC11.51□□□□□ -0.57
TNFRSF18Q9Y5U5 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC11.51□□□□□ -0.57
TNFRSF18Q9Y5U5 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
TNFRSF18Q9Y5U5 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC11.51□□□□□ -0.57
TNFRSF18Q9Y5U5 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
TNFRSF18Q9Y5U5 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC11.51□□□□□ -0.57
TNFRSF18Q9Y5U5 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
TNFRSF18Q9Y5U5 WWTR1-203ENST00000465804 5030 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
TNFRSF18Q9Y5U5 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
TNFRSF18Q9Y5U5 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
TNFRSF18Q9Y5U5 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
TNFRSF18Q9Y5U5 AC020658.6-201ENST00000623564 1870 ntBASIC11.51□□□□□ -0.57
TNFRSF18Q9Y5U5 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC11.51□□□□□ -0.57
TNFRSF18Q9Y5U5 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
TNFRSF18Q9Y5U5 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
TNFRSF18Q9Y5U5 PPT1-215ENST00000641471 2368 ntBASIC11.5□□□□□ -0.57
TNFRSF18Q9Y5U5 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
TNFRSF18Q9Y5U5 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC11.5□□□□□ -0.57
TNFRSF18Q9Y5U5 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC11.5□□□□□ -0.57
TNFRSF18Q9Y5U5 AC008677.1-201ENST00000519230 1561 ntBASIC11.5□□□□□ -0.57
TNFRSF18Q9Y5U5 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
TNFRSF18Q9Y5U5 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC11.5□□□□□ -0.57
TNFRSF18Q9Y5U5 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
TNFRSF18Q9Y5U5 XPO7-201ENST00000252512 4861 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
TNFRSF18Q9Y5U5 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
TNFRSF18Q9Y5U5 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
TNFRSF18Q9Y5U5 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
TNFRSF18Q9Y5U5 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC11.5□□□□□ -0.57
TNFRSF18Q9Y5U5 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
TNFRSF18Q9Y5U5 AC131212.3-201ENST00000624087 4219 ntBASIC11.5□□□□□ -0.57
TNFRSF18Q9Y5U5 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
TNFRSF18Q9Y5U5 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
TNFRSF18Q9Y5U5 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
TNFRSF18Q9Y5U5 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
TNFRSF18Q9Y5U5 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
TNFRSF18Q9Y5U5 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC11.5□□□□□ -0.57
TNFRSF18Q9Y5U5 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
TNFRSF18Q9Y5U5 RPSAP43-201ENST00000402237 625 ntBASIC11.5□□□□□ -0.57
TNFRSF18Q9Y5U5 PRSS29P-201ENST00000440800 595 ntBASIC11.5□□□□□ -0.57
TNFRSF18Q9Y5U5 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC11.5□□□□□ -0.57
TNFRSF18Q9Y5U5 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC11.5□□□□□ -0.57
TNFRSF18Q9Y5U5 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC11.5□□□□□ -0.57
TNFRSF18Q9Y5U5 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC11.5□□□□□ -0.57
TNFRSF18Q9Y5U5 QPRT-203ENST00000562473 579 ntTSL 3 BASIC11.5□□□□□ -0.57
TNFRSF18Q9Y5U5 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
TNFRSF18Q9Y5U5 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
TNFRSF18Q9Y5U5 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC11.5□□□□□ -0.57
TNFRSF18Q9Y5U5 HOTTIP_1.1-201ENST00000620415 57 ntBASIC11.5□□□□□ -0.57
TNFRSF18Q9Y5U5 AC010507.1-201ENST00000633895 436 ntBASIC11.5□□□□□ -0.57
TNFRSF18Q9Y5U5 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
TNFRSF18Q9Y5U5 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
TNFRSF18Q9Y5U5 SUSD6-201ENST00000342745 5388 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
TNFRSF18Q9Y5U5 ZNF862-201ENST00000223210 6950 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
TNFRSF18Q9Y5U5 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
TNFRSF18Q9Y5U5 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
TNFRSF18Q9Y5U5 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
TNFRSF18Q9Y5U5 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
TNFRSF18Q9Y5U5 AC025580.3-201ENST00000617932 1424 ntBASIC11.5□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 66.5 ms