Protein–RNA interactions for Protein: Q9Y2U8

LEMD3, Inner nuclear membrane protein Man1, humanhuman

Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3Q9Y2U8 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LEMD3Q9Y2U8 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LEMD3Q9Y2U8 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
LEMD3Q9Y2U8 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LEMD3Q9Y2U8 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC18.8■□□□□ 0.6
LEMD3Q9Y2U8 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
LEMD3Q9Y2U8 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LEMD3Q9Y2U8 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
LEMD3Q9Y2U8 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC18.8■□□□□ 0.6
LEMD3Q9Y2U8 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LEMD3Q9Y2U8 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC18.8■□□□□ 0.6
LEMD3Q9Y2U8 AC007969.1-201ENST00000433675 447 ntBASIC18.8■□□□□ 0.6
LEMD3Q9Y2U8 CNN2P10-201ENST00000443067 918 ntBASIC18.8■□□□□ 0.6
LEMD3Q9Y2U8 RPSAP36-202ENST00000494591 1261 ntBASIC18.8■□□□□ 0.6
LEMD3Q9Y2U8 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC18.8■□□□□ 0.6
LEMD3Q9Y2U8 AP001258.2-201ENST00000529891 490 ntBASIC18.8■□□□□ 0.6
LEMD3Q9Y2U8 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC18.8■□□□□ 0.6
LEMD3Q9Y2U8 IGHV3OR16-16-201ENST00000563644 343 ntBASIC18.8■□□□□ 0.6
LEMD3Q9Y2U8 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC18.8■□□□□ 0.6
LEMD3Q9Y2U8 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC18.8■□□□□ 0.6
LEMD3Q9Y2U8 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LEMD3Q9Y2U8 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
LEMD3Q9Y2U8 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
LEMD3Q9Y2U8 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
LEMD3Q9Y2U8 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC18.8■□□□□ 0.6
LEMD3Q9Y2U8 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
LEMD3Q9Y2U8 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
LEMD3Q9Y2U8 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
LEMD3Q9Y2U8 AL354989.2-201ENST00000435838 1540 ntBASIC18.79■□□□□ 0.6
LEMD3Q9Y2U8 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LEMD3Q9Y2U8 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LEMD3Q9Y2U8 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC18.79■□□□□ 0.6
LEMD3Q9Y2U8 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LEMD3Q9Y2U8 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
LEMD3Q9Y2U8 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
LEMD3Q9Y2U8 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LEMD3Q9Y2U8 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
LEMD3Q9Y2U8 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LEMD3Q9Y2U8 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
LEMD3Q9Y2U8 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC18.79■□□□□ 0.6
LEMD3Q9Y2U8 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC18.79■□□□□ 0.6
LEMD3Q9Y2U8 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
LEMD3Q9Y2U8 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LEMD3Q9Y2U8 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
LEMD3Q9Y2U8 MTX1P1-201ENST00000440904 838 ntBASIC18.79■□□□□ 0.6
LEMD3Q9Y2U8 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC18.79■□□□□ 0.6
LEMD3Q9Y2U8 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC18.79■□□□□ 0.6
LEMD3Q9Y2U8 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC18.79■□□□□ 0.6
LEMD3Q9Y2U8 SAMD11P1-201ENST00000571429 661 ntBASIC18.79■□□□□ 0.6
LEMD3Q9Y2U8 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC18.79■□□□□ 0.6
LEMD3Q9Y2U8 CYGB-203ENST00000589145 788 ntTSL 3 BASIC18.79■□□□□ 0.6
LEMD3Q9Y2U8 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
LEMD3Q9Y2U8 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC18.79■□□□□ 0.6
LEMD3Q9Y2U8 AL008638.5-201ENST00000623814 1298 ntBASIC18.79■□□□□ 0.6
LEMD3Q9Y2U8 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LEMD3Q9Y2U8 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC18.79■□□□□ 0.6
LEMD3Q9Y2U8 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LEMD3Q9Y2U8 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
LEMD3Q9Y2U8 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC18.79■□□□□ 0.6
LEMD3Q9Y2U8 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC18.79■□□□□ 0.6
LEMD3Q9Y2U8 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
LEMD3Q9Y2U8 PCDH8P1-201ENST00000428983 2773 ntBASIC18.78■□□□□ 0.6
LEMD3Q9Y2U8 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
LEMD3Q9Y2U8 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
LEMD3Q9Y2U8 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
LEMD3Q9Y2U8 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
LEMD3Q9Y2U8 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
LEMD3Q9Y2U8 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
LEMD3Q9Y2U8 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
LEMD3Q9Y2U8 AC024909.3-201ENST00000611513 2257 ntBASIC18.78■□□□□ 0.6
LEMD3Q9Y2U8 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LEMD3Q9Y2U8 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
LEMD3Q9Y2U8 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC18.78■□□□□ 0.6
LEMD3Q9Y2U8 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC18.78■□□□□ 0.6
LEMD3Q9Y2U8 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
LEMD3Q9Y2U8 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC18.78■□□□□ 0.6
LEMD3Q9Y2U8 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC18.78■□□□□ 0.6
LEMD3Q9Y2U8 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC18.78■□□□□ 0.6
LEMD3Q9Y2U8 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC18.78■□□□□ 0.6
LEMD3Q9Y2U8 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC18.78■□□□□ 0.6
LEMD3Q9Y2U8 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC18.78■□□□□ 0.6
LEMD3Q9Y2U8 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC18.78■□□□□ 0.6
LEMD3Q9Y2U8 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC18.78■□□□□ 0.6
LEMD3Q9Y2U8 AC005695.3-201ENST00000614522 232 ntBASIC18.78■□□□□ 0.6
LEMD3Q9Y2U8 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC18.78■□□□□ 0.6
LEMD3Q9Y2U8 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC18.78■□□□□ 0.6
LEMD3Q9Y2U8 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC18.78■□□□□ 0.6
LEMD3Q9Y2U8 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC18.78■□□□□ 0.6
LEMD3Q9Y2U8 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
LEMD3Q9Y2U8 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LEMD3Q9Y2U8 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC18.78■□□□□ 0.6
LEMD3Q9Y2U8 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LEMD3Q9Y2U8 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LEMD3Q9Y2U8 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LEMD3Q9Y2U8 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LEMD3Q9Y2U8 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
LEMD3Q9Y2U8 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC18.78■□□□□ 0.6
LEMD3Q9Y2U8 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
LEMD3Q9Y2U8 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LEMD3Q9Y2U8 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms