Protein–RNA interactions for Protein: Q9Y2B5

VPS9D1, VPS9 domain-containing protein 1, humanhuman

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1Q9Y2B5 SRSF5-205ENST00000553635 1412 ntTSL 2 BASIC15.65■□□□□ 0.1
VPS9D1Q9Y2B5 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
VPS9D1Q9Y2B5 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
VPS9D1Q9Y2B5 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
VPS9D1Q9Y2B5 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
VPS9D1Q9Y2B5 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC15.65■□□□□ 0.1
VPS9D1Q9Y2B5 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC15.65■□□□□ 0.1
VPS9D1Q9Y2B5 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
VPS9D1Q9Y2B5 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
VPS9D1Q9Y2B5 API5-202ENST00000420461 2009 ntTSL 2 BASIC15.65■□□□□ 0.1
VPS9D1Q9Y2B5 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC15.65■□□□□ 0.1
VPS9D1Q9Y2B5 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
VPS9D1Q9Y2B5 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
VPS9D1Q9Y2B5 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
VPS9D1Q9Y2B5 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
VPS9D1Q9Y2B5 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
VPS9D1Q9Y2B5 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
VPS9D1Q9Y2B5 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
VPS9D1Q9Y2B5 OR2I1P-209ENST00000641730 5365 ntBASIC15.64■□□□□ 0.09
VPS9D1Q9Y2B5 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
VPS9D1Q9Y2B5 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
VPS9D1Q9Y2B5 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
VPS9D1Q9Y2B5 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
VPS9D1Q9Y2B5 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC15.64■□□□□ 0.09
VPS9D1Q9Y2B5 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
VPS9D1Q9Y2B5 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
VPS9D1Q9Y2B5 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC15.64■□□□□ 0.09
VPS9D1Q9Y2B5 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
VPS9D1Q9Y2B5 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
VPS9D1Q9Y2B5 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
VPS9D1Q9Y2B5 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
VPS9D1Q9Y2B5 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC15.64■□□□□ 0.09
VPS9D1Q9Y2B5 NME4-207ENST00000450036 985 ntTSL 3 BASIC15.64■□□□□ 0.09
VPS9D1Q9Y2B5 PPP6R2P1-201ENST00000450880 1275 ntBASIC15.64■□□□□ 0.09
VPS9D1Q9Y2B5 KLF2P3-201ENST00000451977 1087 ntBASIC15.64■□□□□ 0.09
VPS9D1Q9Y2B5 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
VPS9D1Q9Y2B5 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC15.64■□□□□ 0.09
VPS9D1Q9Y2B5 AC109322.1-201ENST00000524499 1264 ntBASIC15.64■□□□□ 0.09
VPS9D1Q9Y2B5 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
VPS9D1Q9Y2B5 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC15.64■□□□□ 0.09
VPS9D1Q9Y2B5 AC090971.1-201ENST00000559302 510 ntTSL 2 BASIC15.64■□□□□ 0.09
VPS9D1Q9Y2B5 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC15.64■□□□□ 0.09
VPS9D1Q9Y2B5 AC022558.1-201ENST00000560450 454 ntTSL 3 BASIC15.64■□□□□ 0.09
VPS9D1Q9Y2B5 LSM12-202ENST00000585388 942 ntTSL 3 BASIC15.64■□□□□ 0.09
VPS9D1Q9Y2B5 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC15.64■□□□□ 0.09
VPS9D1Q9Y2B5 AC144521.1-201ENST00000607148 956 ntBASIC15.64■□□□□ 0.09
VPS9D1Q9Y2B5 Z92544.3-201ENST00000624747 417 ntBASIC15.64■□□□□ 0.09
VPS9D1Q9Y2B5 OR10R2-202ENST00000641067 1132 ntAPPRIS ALT2 BASIC15.64■□□□□ 0.09
VPS9D1Q9Y2B5 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC15.64■□□□□ 0.09
VPS9D1Q9Y2B5 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
VPS9D1Q9Y2B5 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
VPS9D1Q9Y2B5 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
VPS9D1Q9Y2B5 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
VPS9D1Q9Y2B5 Z97205.2-201ENST00000564697 1639 ntBASIC15.64■□□□□ 0.09
VPS9D1Q9Y2B5 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC15.64■□□□□ 0.09
VPS9D1Q9Y2B5 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
VPS9D1Q9Y2B5 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC15.64■□□□□ 0.09
VPS9D1Q9Y2B5 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC15.64■□□□□ 0.09
VPS9D1Q9Y2B5 AL109954.1-202ENST00000564051 2148 ntBASIC15.64■□□□□ 0.09
VPS9D1Q9Y2B5 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
VPS9D1Q9Y2B5 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
VPS9D1Q9Y2B5 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
VPS9D1Q9Y2B5 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
VPS9D1Q9Y2B5 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
VPS9D1Q9Y2B5 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
VPS9D1Q9Y2B5 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
VPS9D1Q9Y2B5 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC15.63■□□□□ 0.09
VPS9D1Q9Y2B5 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
VPS9D1Q9Y2B5 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
VPS9D1Q9Y2B5 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
VPS9D1Q9Y2B5 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
VPS9D1Q9Y2B5 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
VPS9D1Q9Y2B5 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
VPS9D1Q9Y2B5 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
VPS9D1Q9Y2B5 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
VPS9D1Q9Y2B5 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
VPS9D1Q9Y2B5 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
VPS9D1Q9Y2B5 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
VPS9D1Q9Y2B5 PSMC1P2-201ENST00000423961 1204 ntBASIC15.63■□□□□ 0.09
VPS9D1Q9Y2B5 AC073115.1-201ENST00000436056 532 ntTSL 4 BASIC15.63■□□□□ 0.09
VPS9D1Q9Y2B5 TARDBPP1-201ENST00000442013 1203 ntBASIC15.63■□□□□ 0.09
VPS9D1Q9Y2B5 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
VPS9D1Q9Y2B5 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC15.63■□□□□ 0.09
VPS9D1Q9Y2B5 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC15.63■□□□□ 0.09
VPS9D1Q9Y2B5 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC15.63■□□□□ 0.09
VPS9D1Q9Y2B5 SLED1-202ENST00000512051 380 ntBASIC15.63■□□□□ 0.09
VPS9D1Q9Y2B5 AC069120.2-201ENST00000524091 540 ntBASIC15.63■□□□□ 0.09
VPS9D1Q9Y2B5 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC15.63■□□□□ 0.09
VPS9D1Q9Y2B5 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC15.63■□□□□ 0.09
VPS9D1Q9Y2B5 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC15.63■□□□□ 0.09
VPS9D1Q9Y2B5 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC15.63■□□□□ 0.09
VPS9D1Q9Y2B5 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC15.63■□□□□ 0.09
VPS9D1Q9Y2B5 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC15.63■□□□□ 0.09
VPS9D1Q9Y2B5 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC15.63■□□□□ 0.09
VPS9D1Q9Y2B5 AC139530.3-201ENST00000620344 690 ntBASIC15.63■□□□□ 0.09
VPS9D1Q9Y2B5 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
VPS9D1Q9Y2B5 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
VPS9D1Q9Y2B5 GSN-206ENST00000394353 2311 ntTSL 2 BASIC15.63■□□□□ 0.09
VPS9D1Q9Y2B5 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
VPS9D1Q9Y2B5 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC15.63■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms