Protein–RNA interactions for Protein: Q9UBT3

DKK4, Dickkopf-related protein 4, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK4Q9UBT3 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
DKK4Q9UBT3 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
DKK4Q9UBT3 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC14.33□□□□□ -0.11
DKK4Q9UBT3 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC14.33□□□□□ -0.11
DKK4Q9UBT3 TBC1D3J-201ENST00000620719 1426 ntBASIC14.33□□□□□ -0.11
DKK4Q9UBT3 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
DKK4Q9UBT3 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
DKK4Q9UBT3 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
DKK4Q9UBT3 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
DKK4Q9UBT3 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
DKK4Q9UBT3 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
DKK4Q9UBT3 CHCHD2-201ENST00000395422 901 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
DKK4Q9UBT3 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
DKK4Q9UBT3 VEGFB-202ENST00000426086 979 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
DKK4Q9UBT3 IL1R2-203ENST00000441002 1106 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
DKK4Q9UBT3 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC14.33□□□□□ -0.12
DKK4Q9UBT3 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC14.33□□□□□ -0.12
DKK4Q9UBT3 HNRNPA1P36-201ENST00000521313 955 ntBASIC14.33□□□□□ -0.12
DKK4Q9UBT3 POU5F1P2-201ENST00000521750 823 ntBASIC14.33□□□□□ -0.12
DKK4Q9UBT3 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC14.33□□□□□ -0.12
DKK4Q9UBT3 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC14.33□□□□□ -0.12
DKK4Q9UBT3 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC14.33□□□□□ -0.12
DKK4Q9UBT3 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC14.33□□□□□ -0.12
DKK4Q9UBT3 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC14.33□□□□□ -0.12
DKK4Q9UBT3 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC14.33□□□□□ -0.12
DKK4Q9UBT3 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
DKK4Q9UBT3 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
DKK4Q9UBT3 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
DKK4Q9UBT3 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC14.33□□□□□ -0.12
DKK4Q9UBT3 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
DKK4Q9UBT3 AC074138.1-201ENST00000611182 1303 ntBASIC14.33□□□□□ -0.12
DKK4Q9UBT3 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
DKK4Q9UBT3 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
DKK4Q9UBT3 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
DKK4Q9UBT3 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
DKK4Q9UBT3 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
DKK4Q9UBT3 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
DKK4Q9UBT3 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
DKK4Q9UBT3 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
DKK4Q9UBT3 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
DKK4Q9UBT3 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
DKK4Q9UBT3 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
DKK4Q9UBT3 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
DKK4Q9UBT3 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
DKK4Q9UBT3 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
DKK4Q9UBT3 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
DKK4Q9UBT3 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC14.32□□□□□ -0.12
DKK4Q9UBT3 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
DKK4Q9UBT3 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC14.32□□□□□ -0.12
DKK4Q9UBT3 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
DKK4Q9UBT3 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
DKK4Q9UBT3 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
DKK4Q9UBT3 AC092171.3-201ENST00000610122 2651 ntBASIC14.32□□□□□ -0.12
DKK4Q9UBT3 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
DKK4Q9UBT3 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
DKK4Q9UBT3 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
DKK4Q9UBT3 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
DKK4Q9UBT3 PDE6G-201ENST00000331056 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
DKK4Q9UBT3 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
DKK4Q9UBT3 APOA1-202ENST00000359492 932 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
DKK4Q9UBT3 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC14.32□□□□□ -0.12
DKK4Q9UBT3 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
DKK4Q9UBT3 AL627231.1-201ENST00000394467 1125 ntBASIC14.32□□□□□ -0.12
DKK4Q9UBT3 TRO-205ENST00000399736 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
DKK4Q9UBT3 CRYBB3-202ENST00000404334 601 ntTSL 3 BASIC14.32□□□□□ -0.12
DKK4Q9UBT3 RPS9P1-201ENST00000419943 583 ntBASIC14.32□□□□□ -0.12
DKK4Q9UBT3 EIF3FP3-201ENST00000434851 1086 ntBASIC14.32□□□□□ -0.12
DKK4Q9UBT3 RN7SL258P-201ENST00000478664 300 ntBASIC14.32□□□□□ -0.12
DKK4Q9UBT3 AC004066.1-201ENST00000502488 802 ntBASIC14.32□□□□□ -0.12
DKK4Q9UBT3 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC14.32□□□□□ -0.12
DKK4Q9UBT3 MEF2C-AS2-201ENST00000510274 463 ntTSL 5 BASIC14.32□□□□□ -0.12
DKK4Q9UBT3 IGHV3-37-201ENST00000518544 340 ntBASIC14.32□□□□□ -0.12
DKK4Q9UBT3 AP002803.1-201ENST00000528836 498 ntBASIC14.32□□□□□ -0.12
DKK4Q9UBT3 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC14.32□□□□□ -0.12
DKK4Q9UBT3 FAM227B-210ENST00000560246 911 ntAPPRIS ALT2 TSL 3 BASIC14.32□□□□□ -0.12
DKK4Q9UBT3 TPM1-223ENST00000560445 485 ntTSL 3 BASIC14.32□□□□□ -0.12
DKK4Q9UBT3 LINC01584-201ENST00000562495 676 ntTSL 5 BASIC14.32□□□□□ -0.12
DKK4Q9UBT3 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
DKK4Q9UBT3 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC14.32□□□□□ -0.12
DKK4Q9UBT3 SNORD3B-2-202ENST00000571722 791 ntBASIC14.32□□□□□ -0.12
DKK4Q9UBT3 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC14.32□□□□□ -0.12
DKK4Q9UBT3 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC14.32□□□□□ -0.12
DKK4Q9UBT3 CDK7-214ENST00000626796 358 ntTSL 5 BASIC14.32□□□□□ -0.12
DKK4Q9UBT3 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC14.32□□□□□ -0.12
DKK4Q9UBT3 PCBP2-OT1-201ENST00000634357 590 ntBASIC14.32□□□□□ -0.12
DKK4Q9UBT3 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
DKK4Q9UBT3 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
DKK4Q9UBT3 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
DKK4Q9UBT3 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC14.32□□□□□ -0.12
DKK4Q9UBT3 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
DKK4Q9UBT3 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
DKK4Q9UBT3 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC14.32□□□□□ -0.12
DKK4Q9UBT3 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
DKK4Q9UBT3 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC14.32□□□□□ -0.12
DKK4Q9UBT3 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
DKK4Q9UBT3 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC14.32□□□□□ -0.12
DKK4Q9UBT3 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
DKK4Q9UBT3 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
DKK4Q9UBT3 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
DKK4Q9UBT3 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms