Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC16.37■□□□□ 0.21
PPARGC1AQ9UBK2 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC16.37■□□□□ 0.21
PPARGC1AQ9UBK2 PRR29-204ENST00000577953 565 ntTSL 4 BASIC16.37■□□□□ 0.21
PPARGC1AQ9UBK2 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PPARGC1AQ9UBK2 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC16.37■□□□□ 0.21
PPARGC1AQ9UBK2 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
PPARGC1AQ9UBK2 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC16.37■□□□□ 0.21
PPARGC1AQ9UBK2 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
PPARGC1AQ9UBK2 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PPARGC1AQ9UBK2 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC16.37■□□□□ 0.21
PPARGC1AQ9UBK2 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PPARGC1AQ9UBK2 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
PPARGC1AQ9UBK2 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
PPARGC1AQ9UBK2 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PPARGC1AQ9UBK2 AC018892.3-201ENST00000623986 2499 ntBASIC16.37■□□□□ 0.21
PPARGC1AQ9UBK2 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC16.37■□□□□ 0.21
PPARGC1AQ9UBK2 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PPARGC1AQ9UBK2 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PPARGC1AQ9UBK2 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PPARGC1AQ9UBK2 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
PPARGC1AQ9UBK2 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PPARGC1AQ9UBK2 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PPARGC1AQ9UBK2 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PPARGC1AQ9UBK2 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PPARGC1AQ9UBK2 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
PPARGC1AQ9UBK2 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
PPARGC1AQ9UBK2 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC16.36■□□□□ 0.21
PPARGC1AQ9UBK2 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PPARGC1AQ9UBK2 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
PPARGC1AQ9UBK2 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PPARGC1AQ9UBK2 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
PPARGC1AQ9UBK2 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PPARGC1AQ9UBK2 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
PPARGC1AQ9UBK2 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PPARGC1AQ9UBK2 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC16.36■□□□□ 0.21
PPARGC1AQ9UBK2 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PPARGC1AQ9UBK2 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
PPARGC1AQ9UBK2 MRPS18AP1-201ENST00000414458 589 ntBASIC16.36■□□□□ 0.21
PPARGC1AQ9UBK2 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC16.36■□□□□ 0.21
PPARGC1AQ9UBK2 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC16.36■□□□□ 0.21
PPARGC1AQ9UBK2 TARDBPP1-201ENST00000442013 1203 ntBASIC16.36■□□□□ 0.21
PPARGC1AQ9UBK2 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC16.36■□□□□ 0.21
PPARGC1AQ9UBK2 NAA60-208ENST00000570819 833 ntTSL 2 BASIC16.36■□□□□ 0.21
PPARGC1AQ9UBK2 MIR4313-201ENST00000580760 101 ntBASIC16.36■□□□□ 0.21
PPARGC1AQ9UBK2 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC16.36■□□□□ 0.21
PPARGC1AQ9UBK2 INO80C-206ENST00000586489 594 ntTSL 3 BASIC16.36■□□□□ 0.21
PPARGC1AQ9UBK2 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PPARGC1AQ9UBK2 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC16.36■□□□□ 0.21
PPARGC1AQ9UBK2 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC16.36■□□□□ 0.21
PPARGC1AQ9UBK2 AL096865.1-201ENST00000606796 927 ntBASIC16.36■□□□□ 0.21
PPARGC1AQ9UBK2 AC074044.1-201ENST00000609673 707 ntBASIC16.36■□□□□ 0.21
PPARGC1AQ9UBK2 AJ011932.1-201ENST00000621707 465 ntBASIC16.36■□□□□ 0.21
PPARGC1AQ9UBK2 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
PPARGC1AQ9UBK2 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC16.36■□□□□ 0.21
PPARGC1AQ9UBK2 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC16.36■□□□□ 0.21
PPARGC1AQ9UBK2 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC16.36■□□□□ 0.21
PPARGC1AQ9UBK2 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PPARGC1AQ9UBK2 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PPARGC1AQ9UBK2 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC16.36■□□□□ 0.21
PPARGC1AQ9UBK2 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC16.36■□□□□ 0.21
PPARGC1AQ9UBK2 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC16.36■□□□□ 0.21
PPARGC1AQ9UBK2 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PPARGC1AQ9UBK2 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
PPARGC1AQ9UBK2 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC16.36■□□□□ 0.21
PPARGC1AQ9UBK2 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC16.36■□□□□ 0.21
PPARGC1AQ9UBK2 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC16.36■□□□□ 0.21
PPARGC1AQ9UBK2 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
PPARGC1AQ9UBK2 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PPARGC1AQ9UBK2 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC16.35■□□□□ 0.21
PPARGC1AQ9UBK2 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
PPARGC1AQ9UBK2 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC16.35■□□□□ 0.21
PPARGC1AQ9UBK2 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PPARGC1AQ9UBK2 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PPARGC1AQ9UBK2 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC16.35■□□□□ 0.21
PPARGC1AQ9UBK2 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
PPARGC1AQ9UBK2 GRN-214ENST00000589265 1632 ntTSL 5 BASIC16.35■□□□□ 0.21
PPARGC1AQ9UBK2 AC099063.4-201ENST00000641099 1602 ntBASIC16.35■□□□□ 0.21
PPARGC1AQ9UBK2 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
PPARGC1AQ9UBK2 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
PPARGC1AQ9UBK2 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PPARGC1AQ9UBK2 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
PPARGC1AQ9UBK2 AC114501.2-201ENST00000439631 535 ntBASIC16.35■□□□□ 0.21
PPARGC1AQ9UBK2 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC16.35■□□□□ 0.21
PPARGC1AQ9UBK2 NME4-207ENST00000450036 985 ntTSL 3 BASIC16.35■□□□□ 0.21
PPARGC1AQ9UBK2 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC16.35■□□□□ 0.21
PPARGC1AQ9UBK2 AC044860.1-202ENST00000559481 777 ntBASIC16.35■□□□□ 0.21
PPARGC1AQ9UBK2 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC16.35■□□□□ 0.21
PPARGC1AQ9UBK2 SPCS2P1-201ENST00000561636 679 ntBASIC16.35■□□□□ 0.21
PPARGC1AQ9UBK2 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC16.35■□□□□ 0.21
PPARGC1AQ9UBK2 AC011467.4-201ENST00000594891 528 ntBASIC16.35■□□□□ 0.21
PPARGC1AQ9UBK2 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC16.35■□□□□ 0.21
PPARGC1AQ9UBK2 TEX48-202ENST00000612244 662 ntTSL 3 BASIC16.35■□□□□ 0.21
PPARGC1AQ9UBK2 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC16.35■□□□□ 0.21
PPARGC1AQ9UBK2 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC16.35■□□□□ 0.21
PPARGC1AQ9UBK2 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PPARGC1AQ9UBK2 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PPARGC1AQ9UBK2 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC16.35■□□□□ 0.21
PPARGC1AQ9UBK2 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC16.35■□□□□ 0.21
PPARGC1AQ9UBK2 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC16.35■□□□□ 0.21
PPARGC1AQ9UBK2 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC16.35■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms