Protein–RNA interactions for Protein: Q9NXB0

MKS1, Meckel syndrome type 1 protein, humanhuman

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1Q9NXB0 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC15.44■□□□□ 0.06
MKS1Q9NXB0 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
MKS1Q9NXB0 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
MKS1Q9NXB0 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC15.44■□□□□ 0.06
MKS1Q9NXB0 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
MKS1Q9NXB0 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
MKS1Q9NXB0 RARRES2P9-201ENST00000565168 469 ntBASIC15.44■□□□□ 0.06
MKS1Q9NXB0 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC15.44■□□□□ 0.06
MKS1Q9NXB0 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC15.44■□□□□ 0.06
MKS1Q9NXB0 AC026120.1-201ENST00000611536 926 ntBASIC15.44■□□□□ 0.06
MKS1Q9NXB0 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
MKS1Q9NXB0 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
MKS1Q9NXB0 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC15.44■□□□□ 0.06
MKS1Q9NXB0 TKT-201ENST00000296289 1931 ntTSL 5 BASIC15.44■□□□□ 0.06
MKS1Q9NXB0 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
MKS1Q9NXB0 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC15.44■□□□□ 0.06
MKS1Q9NXB0 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC15.44■□□□□ 0.06
MKS1Q9NXB0 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
MKS1Q9NXB0 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC15.44■□□□□ 0.06
MKS1Q9NXB0 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC15.44■□□□□ 0.06
MKS1Q9NXB0 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
MKS1Q9NXB0 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
MKS1Q9NXB0 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
MKS1Q9NXB0 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.43■□□□□ 0.06
MKS1Q9NXB0 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
MKS1Q9NXB0 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
MKS1Q9NXB0 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
MKS1Q9NXB0 AC104581.4-201ENST00000623126 3052 ntBASIC15.43■□□□□ 0.06
MKS1Q9NXB0 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
MKS1Q9NXB0 AC113367.3-201ENST00000508316 1912 ntBASIC15.43■□□□□ 0.06
MKS1Q9NXB0 AC007686.3-201ENST00000619017 3487 ntBASIC15.43■□□□□ 0.06
MKS1Q9NXB0 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
MKS1Q9NXB0 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
MKS1Q9NXB0 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
MKS1Q9NXB0 NEK7-201ENST00000367383 586 ntTSL 2 BASIC15.43■□□□□ 0.06
MKS1Q9NXB0 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC15.43■□□□□ 0.06
MKS1Q9NXB0 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC15.43■□□□□ 0.06
MKS1Q9NXB0 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC15.43■□□□□ 0.06
MKS1Q9NXB0 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC15.43■□□□□ 0.06
MKS1Q9NXB0 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC15.43■□□□□ 0.06
MKS1Q9NXB0 AC079140.1-201ENST00000508039 487 ntBASIC15.43■□□□□ 0.06
MKS1Q9NXB0 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC15.43■□□□□ 0.06
MKS1Q9NXB0 AC106730.1-201ENST00000566722 1090 ntBASIC15.43■□□□□ 0.06
MKS1Q9NXB0 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC15.43■□□□□ 0.06
MKS1Q9NXB0 AC015910.1-201ENST00000579400 975 ntBASIC15.43■□□□□ 0.06
MKS1Q9NXB0 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC15.43■□□□□ 0.06
MKS1Q9NXB0 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC15.43■□□□□ 0.06
MKS1Q9NXB0 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC15.43■□□□□ 0.06
MKS1Q9NXB0 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC15.43■□□□□ 0.06
MKS1Q9NXB0 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC15.43■□□□□ 0.06
MKS1Q9NXB0 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
MKS1Q9NXB0 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
MKS1Q9NXB0 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
MKS1Q9NXB0 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC15.43■□□□□ 0.06
MKS1Q9NXB0 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
MKS1Q9NXB0 MFF-204ENST00000353339 2186 ntTSL 5 BASIC15.43■□□□□ 0.06
MKS1Q9NXB0 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
MKS1Q9NXB0 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
MKS1Q9NXB0 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
MKS1Q9NXB0 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
MKS1Q9NXB0 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
MKS1Q9NXB0 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC15.43■□□□□ 0.06
MKS1Q9NXB0 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
MKS1Q9NXB0 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC15.43■□□□□ 0.06
MKS1Q9NXB0 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
MKS1Q9NXB0 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
MKS1Q9NXB0 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
MKS1Q9NXB0 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC15.43■□□□□ 0.06
MKS1Q9NXB0 GRN-214ENST00000589265 1632 ntTSL 5 BASIC15.43■□□□□ 0.06
MKS1Q9NXB0 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
MKS1Q9NXB0 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
MKS1Q9NXB0 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
MKS1Q9NXB0 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
MKS1Q9NXB0 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC15.42■□□□□ 0.06
MKS1Q9NXB0 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
MKS1Q9NXB0 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
MKS1Q9NXB0 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
MKS1Q9NXB0 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC15.42■□□□□ 0.06
MKS1Q9NXB0 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
MKS1Q9NXB0 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
MKS1Q9NXB0 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC15.42■□□□□ 0.06
MKS1Q9NXB0 AC012508.2-201ENST00000567613 1472 ntBASIC15.42■□□□□ 0.06
MKS1Q9NXB0 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
MKS1Q9NXB0 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
MKS1Q9NXB0 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC15.42■□□□□ 0.06
MKS1Q9NXB0 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
MKS1Q9NXB0 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC15.42■□□□□ 0.06
MKS1Q9NXB0 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
MKS1Q9NXB0 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
MKS1Q9NXB0 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
MKS1Q9NXB0 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC15.42■□□□□ 0.06
MKS1Q9NXB0 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC15.42■□□□□ 0.06
MKS1Q9NXB0 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC15.42■□□□□ 0.06
MKS1Q9NXB0 SPDYE11-202ENST00000450699 704 ntBASIC15.42■□□□□ 0.06
MKS1Q9NXB0 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC15.42■□□□□ 0.06
MKS1Q9NXB0 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC15.42■□□□□ 0.06
MKS1Q9NXB0 KRT8P48-201ENST00000515599 1220 ntBASIC15.42■□□□□ 0.06
MKS1Q9NXB0 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
MKS1Q9NXB0 RPL18-209ENST00000550645 463 ntTSL 5 BASIC15.42■□□□□ 0.06
MKS1Q9NXB0 RPL18-214ENST00000552588 559 ntTSL 3 BASIC15.42■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms