Protein–RNA interactions for Protein: Q9NTX5

ECHDC1, Ethylmalonyl-CoA decarboxylase, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1Q9NTX5 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
ECHDC1Q9NTX5 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ECHDC1Q9NTX5 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
ECHDC1Q9NTX5 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ECHDC1Q9NTX5 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC19■□□□□ 0.63
ECHDC1Q9NTX5 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC19■□□□□ 0.63
ECHDC1Q9NTX5 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ECHDC1Q9NTX5 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ECHDC1Q9NTX5 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC19■□□□□ 0.63
ECHDC1Q9NTX5 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ECHDC1Q9NTX5 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
ECHDC1Q9NTX5 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC19■□□□□ 0.63
ECHDC1Q9NTX5 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ECHDC1Q9NTX5 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ECHDC1Q9NTX5 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC19■□□□□ 0.63
ECHDC1Q9NTX5 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC19■□□□□ 0.63
ECHDC1Q9NTX5 AL353779.1-201ENST00000434793 351 ntBASIC19■□□□□ 0.63
ECHDC1Q9NTX5 TERF1P3-201ENST00000505638 1227 ntBASIC19■□□□□ 0.63
ECHDC1Q9NTX5 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC19■□□□□ 0.63
ECHDC1Q9NTX5 API5-211ENST00000534695 560 ntTSL 5 BASIC19■□□□□ 0.63
ECHDC1Q9NTX5 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC19■□□□□ 0.63
ECHDC1Q9NTX5 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC19■□□□□ 0.63
ECHDC1Q9NTX5 CHCHD2P3-201ENST00000603038 451 ntBASIC19■□□□□ 0.63
ECHDC1Q9NTX5 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC19■□□□□ 0.63
ECHDC1Q9NTX5 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC19■□□□□ 0.63
ECHDC1Q9NTX5 AL391825.1-201ENST00000457671 1364 ntBASIC19■□□□□ 0.63
ECHDC1Q9NTX5 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC19■□□□□ 0.63
ECHDC1Q9NTX5 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC19■□□□□ 0.63
ECHDC1Q9NTX5 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ECHDC1Q9NTX5 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
ECHDC1Q9NTX5 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ECHDC1Q9NTX5 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC19■□□□□ 0.63
ECHDC1Q9NTX5 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ECHDC1Q9NTX5 STRN-202ENST00000379213 2254 ntTSL 5 BASIC19■□□□□ 0.63
ECHDC1Q9NTX5 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC19■□□□□ 0.63
ECHDC1Q9NTX5 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC19■□□□□ 0.63
ECHDC1Q9NTX5 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
ECHDC1Q9NTX5 LTF-203ENST00000426532 2494 ntTSL 2 BASIC19■□□□□ 0.63
ECHDC1Q9NTX5 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC19■□□□□ 0.63
ECHDC1Q9NTX5 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ECHDC1Q9NTX5 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC19■□□□□ 0.63
ECHDC1Q9NTX5 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ECHDC1Q9NTX5 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ECHDC1Q9NTX5 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
ECHDC1Q9NTX5 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC19■□□□□ 0.63
ECHDC1Q9NTX5 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
ECHDC1Q9NTX5 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC18.99■□□□□ 0.63
ECHDC1Q9NTX5 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
ECHDC1Q9NTX5 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ECHDC1Q9NTX5 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC18.99■□□□□ 0.63
ECHDC1Q9NTX5 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
ECHDC1Q9NTX5 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
ECHDC1Q9NTX5 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC18.99■□□□□ 0.63
ECHDC1Q9NTX5 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ECHDC1Q9NTX5 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
ECHDC1Q9NTX5 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
ECHDC1Q9NTX5 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
ECHDC1Q9NTX5 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
ECHDC1Q9NTX5 PIN1P1-201ENST00000412108 996 ntBASIC18.99■□□□□ 0.63
ECHDC1Q9NTX5 PFN2-205ENST00000461868 613 ntTSL 2 BASIC18.99■□□□□ 0.63
ECHDC1Q9NTX5 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC18.99■□□□□ 0.63
ECHDC1Q9NTX5 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC18.99■□□□□ 0.63
ECHDC1Q9NTX5 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC18.99■□□□□ 0.63
ECHDC1Q9NTX5 GREM1-201ENST00000560677 623 ntTSL 4 BASIC18.99■□□□□ 0.63
ECHDC1Q9NTX5 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC18.99■□□□□ 0.63
ECHDC1Q9NTX5 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC18.99■□□□□ 0.63
ECHDC1Q9NTX5 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ECHDC1Q9NTX5 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC18.99■□□□□ 0.63
ECHDC1Q9NTX5 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
ECHDC1Q9NTX5 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ECHDC1Q9NTX5 SLC9A7P1-201ENST00000554295 3311 ntBASIC18.99■□□□□ 0.63
ECHDC1Q9NTX5 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC18.99■□□□□ 0.63
ECHDC1Q9NTX5 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
ECHDC1Q9NTX5 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ECHDC1Q9NTX5 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ECHDC1Q9NTX5 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
ECHDC1Q9NTX5 AC126365.1-201ENST00000578585 1514 ntBASIC18.99■□□□□ 0.63
ECHDC1Q9NTX5 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC18.99■□□□□ 0.63
ECHDC1Q9NTX5 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
ECHDC1Q9NTX5 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
ECHDC1Q9NTX5 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC18.98■□□□□ 0.63
ECHDC1Q9NTX5 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC18.98■□□□□ 0.63
ECHDC1Q9NTX5 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ECHDC1Q9NTX5 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC18.98■□□□□ 0.63
ECHDC1Q9NTX5 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
ECHDC1Q9NTX5 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
ECHDC1Q9NTX5 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
ECHDC1Q9NTX5 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
ECHDC1Q9NTX5 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ECHDC1Q9NTX5 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ECHDC1Q9NTX5 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC18.98■□□□□ 0.63
ECHDC1Q9NTX5 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC18.98■□□□□ 0.63
ECHDC1Q9NTX5 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC18.98■□□□□ 0.63
ECHDC1Q9NTX5 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC18.98■□□□□ 0.63
ECHDC1Q9NTX5 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC18.98■□□□□ 0.63
ECHDC1Q9NTX5 CDK4-206ENST00000549606 558 ntTSL 2 BASIC18.98■□□□□ 0.63
ECHDC1Q9NTX5 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC18.98■□□□□ 0.63
ECHDC1Q9NTX5 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC18.98■□□□□ 0.63
ECHDC1Q9NTX5 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC18.98■□□□□ 0.63
ECHDC1Q9NTX5 AC093726.1-201ENST00000608064 963 ntBASIC18.98■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 66.9 ms