Protein–RNA interactions for Protein: Q9NP62

GCM1, Chorion-specific transcription factor GCMa, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCM1Q9NP62 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC13.43□□□□□ -0.26
GCM1Q9NP62 STOM-203ENST00000538954 1257 ntTSL 5 BASIC13.43□□□□□ -0.26
GCM1Q9NP62 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
GCM1Q9NP62 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC13.43□□□□□ -0.26
GCM1Q9NP62 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
GCM1Q9NP62 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
GCM1Q9NP62 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC13.43□□□□□ -0.26
GCM1Q9NP62 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC13.43□□□□□ -0.26
GCM1Q9NP62 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC13.43□□□□□ -0.26
GCM1Q9NP62 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
GCM1Q9NP62 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC13.43□□□□□ -0.26
GCM1Q9NP62 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC13.43□□□□□ -0.26
GCM1Q9NP62 AC008738.7-201ENST00000609744 511 ntBASIC13.43□□□□□ -0.26
GCM1Q9NP62 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC13.43□□□□□ -0.26
GCM1Q9NP62 AL109936.8-201ENST00000641772 604 ntBASIC13.43□□□□□ -0.26
GCM1Q9NP62 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
GCM1Q9NP62 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC13.43□□□□□ -0.26
GCM1Q9NP62 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC13.43□□□□□ -0.26
GCM1Q9NP62 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC13.43□□□□□ -0.26
GCM1Q9NP62 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC13.43□□□□□ -0.26
GCM1Q9NP62 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC13.43□□□□□ -0.26
GCM1Q9NP62 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
GCM1Q9NP62 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC13.43□□□□□ -0.26
GCM1Q9NP62 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
GCM1Q9NP62 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC13.43□□□□□ -0.26
GCM1Q9NP62 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
GCM1Q9NP62 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
GCM1Q9NP62 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
GCM1Q9NP62 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC13.43□□□□□ -0.26
GCM1Q9NP62 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC13.42□□□□□ -0.26
GCM1Q9NP62 Z97205.2-201ENST00000564697 1639 ntBASIC13.42□□□□□ -0.26
GCM1Q9NP62 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC13.42□□□□□ -0.26
GCM1Q9NP62 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
GCM1Q9NP62 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
GCM1Q9NP62 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
GCM1Q9NP62 VILL-207ENST00000465644 1857 ntTSL 5 BASIC13.42□□□□□ -0.26
GCM1Q9NP62 AP003680.1-201ENST00000598970 3660 ntBASIC13.42□□□□□ -0.26
GCM1Q9NP62 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
GCM1Q9NP62 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
GCM1Q9NP62 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
GCM1Q9NP62 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
GCM1Q9NP62 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
GCM1Q9NP62 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
GCM1Q9NP62 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
GCM1Q9NP62 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC13.42□□□□□ -0.26
GCM1Q9NP62 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC13.42□□□□□ -0.26
GCM1Q9NP62 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
GCM1Q9NP62 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC13.42□□□□□ -0.26
GCM1Q9NP62 TSPY16P-201ENST00000449843 468 ntBASIC13.42□□□□□ -0.26
GCM1Q9NP62 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
GCM1Q9NP62 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC13.42□□□□□ -0.26
GCM1Q9NP62 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
GCM1Q9NP62 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC13.42□□□□□ -0.26
GCM1Q9NP62 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC13.42□□□□□ -0.26
GCM1Q9NP62 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
GCM1Q9NP62 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
GCM1Q9NP62 AC074044.1-201ENST00000609673 707 ntBASIC13.42□□□□□ -0.26
GCM1Q9NP62 TEX48-202ENST00000612244 662 ntTSL 3 BASIC13.42□□□□□ -0.26
GCM1Q9NP62 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
GCM1Q9NP62 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
GCM1Q9NP62 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
GCM1Q9NP62 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
GCM1Q9NP62 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
GCM1Q9NP62 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
GCM1Q9NP62 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
GCM1Q9NP62 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
GCM1Q9NP62 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
GCM1Q9NP62 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC13.42□□□□□ -0.26
GCM1Q9NP62 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
GCM1Q9NP62 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
GCM1Q9NP62 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
GCM1Q9NP62 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC13.42□□□□□ -0.26
GCM1Q9NP62 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
GCM1Q9NP62 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC13.41□□□□□ -0.26
GCM1Q9NP62 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC13.41□□□□□ -0.26
GCM1Q9NP62 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
GCM1Q9NP62 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC13.41□□□□□ -0.26
GCM1Q9NP62 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
GCM1Q9NP62 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC13.41□□□□□ -0.26
GCM1Q9NP62 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
GCM1Q9NP62 AL365203.3-201ENST00000609742 2057 ntBASIC13.41□□□□□ -0.26
GCM1Q9NP62 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
GCM1Q9NP62 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
GCM1Q9NP62 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC13.41□□□□□ -0.26
GCM1Q9NP62 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
GCM1Q9NP62 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC13.41□□□□□ -0.26
GCM1Q9NP62 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC13.41□□□□□ -0.26
GCM1Q9NP62 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
GCM1Q9NP62 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
GCM1Q9NP62 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
GCM1Q9NP62 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
GCM1Q9NP62 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
GCM1Q9NP62 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC13.41□□□□□ -0.26
GCM1Q9NP62 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC13.41□□□□□ -0.26
GCM1Q9NP62 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
GCM1Q9NP62 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
GCM1Q9NP62 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC13.41□□□□□ -0.26
GCM1Q9NP62 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC13.41□□□□□ -0.26
GCM1Q9NP62 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
GCM1Q9NP62 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC13.41□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms