Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC15.67■□□□□ 0.1
TM9SF3Q9HD45 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
TM9SF3Q9HD45 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
TM9SF3Q9HD45 STX1A-203ENST00000395155 783 ntTSL 2 BASIC15.67■□□□□ 0.1
TM9SF3Q9HD45 AC134915.1-201ENST00000426461 574 ntBASIC15.67■□□□□ 0.1
TM9SF3Q9HD45 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC15.67■□□□□ 0.1
TM9SF3Q9HD45 USP40-206ENST00000443711 628 ntTSL 2 BASIC15.67■□□□□ 0.1
TM9SF3Q9HD45 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC15.67■□□□□ 0.1
TM9SF3Q9HD45 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC15.67■□□□□ 0.1
TM9SF3Q9HD45 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC15.67■□□□□ 0.1
TM9SF3Q9HD45 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC15.67■□□□□ 0.1
TM9SF3Q9HD45 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC15.67■□□□□ 0.1
TM9SF3Q9HD45 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TM9SF3Q9HD45 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC15.67■□□□□ 0.1
TM9SF3Q9HD45 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TM9SF3Q9HD45 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TM9SF3Q9HD45 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC15.67■□□□□ 0.1
TM9SF3Q9HD45 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC15.67■□□□□ 0.1
TM9SF3Q9HD45 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TM9SF3Q9HD45 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TM9SF3Q9HD45 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
TM9SF3Q9HD45 VILL-207ENST00000465644 1857 ntTSL 5 BASIC15.67■□□□□ 0.1
TM9SF3Q9HD45 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
TM9SF3Q9HD45 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
TM9SF3Q9HD45 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
TM9SF3Q9HD45 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
TM9SF3Q9HD45 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TM9SF3Q9HD45 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC15.67■□□□□ 0.1
TM9SF3Q9HD45 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TM9SF3Q9HD45 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TM9SF3Q9HD45 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
TM9SF3Q9HD45 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
TM9SF3Q9HD45 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC15.66■□□□□ 0.1
TM9SF3Q9HD45 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TM9SF3Q9HD45 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TM9SF3Q9HD45 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TM9SF3Q9HD45 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC15.66■□□□□ 0.1
TM9SF3Q9HD45 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC15.66■□□□□ 0.1
TM9SF3Q9HD45 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC15.66■□□□□ 0.1
TM9SF3Q9HD45 ACE-204ENST00000428043 5120 ntTSL 2 BASIC15.66■□□□□ 0.1
TM9SF3Q9HD45 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
TM9SF3Q9HD45 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
TM9SF3Q9HD45 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC15.66■□□□□ 0.1
TM9SF3Q9HD45 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC15.66■□□□□ 0.1
TM9SF3Q9HD45 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TM9SF3Q9HD45 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TM9SF3Q9HD45 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC15.66■□□□□ 0.1
TM9SF3Q9HD45 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC15.66■□□□□ 0.1
TM9SF3Q9HD45 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
TM9SF3Q9HD45 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
TM9SF3Q9HD45 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC15.66■□□□□ 0.1
TM9SF3Q9HD45 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
TM9SF3Q9HD45 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
TM9SF3Q9HD45 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TM9SF3Q9HD45 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
TM9SF3Q9HD45 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
TM9SF3Q9HD45 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC15.66■□□□□ 0.1
TM9SF3Q9HD45 BCRP2-202ENST00000447763 634 ntBASIC15.66■□□□□ 0.1
TM9SF3Q9HD45 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC15.66■□□□□ 0.1
TM9SF3Q9HD45 BCRP6-201ENST00000510112 632 ntBASIC15.66■□□□□ 0.1
TM9SF3Q9HD45 BCRP7-201ENST00000511549 544 ntBASIC15.66■□□□□ 0.1
TM9SF3Q9HD45 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC15.66■□□□□ 0.1
TM9SF3Q9HD45 ENPP7P5-201ENST00000541031 1031 ntBASIC15.66■□□□□ 0.1
TM9SF3Q9HD45 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC15.66■□□□□ 0.1
TM9SF3Q9HD45 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TM9SF3Q9HD45 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC15.66■□□□□ 0.1
TM9SF3Q9HD45 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TM9SF3Q9HD45 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC15.66■□□□□ 0.1
TM9SF3Q9HD45 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TM9SF3Q9HD45 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC15.66■□□□□ 0.1
TM9SF3Q9HD45 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TM9SF3Q9HD45 INTS4P2-202ENST00000614726 2019 ntBASIC15.66■□□□□ 0.1
TM9SF3Q9HD45 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC15.66■□□□□ 0.1
TM9SF3Q9HD45 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
TM9SF3Q9HD45 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TM9SF3Q9HD45 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TM9SF3Q9HD45 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC15.66■□□□□ 0.1
TM9SF3Q9HD45 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TM9SF3Q9HD45 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TM9SF3Q9HD45 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TM9SF3Q9HD45 AC093525.8-201ENST00000624099 1342 ntBASIC15.66■□□□□ 0.1
TM9SF3Q9HD45 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TM9SF3Q9HD45 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
TM9SF3Q9HD45 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
TM9SF3Q9HD45 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC15.65■□□□□ 0.1
TM9SF3Q9HD45 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
TM9SF3Q9HD45 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC15.65■□□□□ 0.1
TM9SF3Q9HD45 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TM9SF3Q9HD45 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TM9SF3Q9HD45 AC104640.1-201ENST00000562617 2109 ntBASIC15.65■□□□□ 0.1
TM9SF3Q9HD45 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TM9SF3Q9HD45 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
TM9SF3Q9HD45 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
TM9SF3Q9HD45 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
TM9SF3Q9HD45 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC15.65■□□□□ 0.1
TM9SF3Q9HD45 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TM9SF3Q9HD45 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC15.65■□□□□ 0.1
TM9SF3Q9HD45 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC15.65■□□□□ 0.1
TM9SF3Q9HD45 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
TM9SF3Q9HD45 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms