Protein–RNA interactions for Protein: Q9H788

SH2D4A, SH2 domain-containing protein 4A, humanhuman

Predictions only

Length 454 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4AQ9H788 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
SH2D4AQ9H788 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SH2D4AQ9H788 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC18.18■□□□□ 0.5
SH2D4AQ9H788 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC18.18■□□□□ 0.5
SH2D4AQ9H788 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SH2D4AQ9H788 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC18.18■□□□□ 0.5
SH2D4AQ9H788 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SH2D4AQ9H788 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SH2D4AQ9H788 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC18.18■□□□□ 0.5
SH2D4AQ9H788 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SH2D4AQ9H788 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
SH2D4AQ9H788 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SH2D4AQ9H788 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SH2D4AQ9H788 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC18.18■□□□□ 0.5
SH2D4AQ9H788 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
SH2D4AQ9H788 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
SH2D4AQ9H788 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SH2D4AQ9H788 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC18.18■□□□□ 0.5
SH2D4AQ9H788 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SH2D4AQ9H788 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
SH2D4AQ9H788 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
SH2D4AQ9H788 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
SH2D4AQ9H788 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SH2D4AQ9H788 RPF1-202ENST00000370656 724 ntTSL 2 BASIC18.18■□□□□ 0.5
SH2D4AQ9H788 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
SH2D4AQ9H788 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SH2D4AQ9H788 AC092933.1-201ENST00000393644 945 ntBASIC18.18■□□□□ 0.5
SH2D4AQ9H788 AC016694.1-201ENST00000434179 700 ntBASIC18.18■□□□□ 0.5
SH2D4AQ9H788 FO681548.1-201ENST00000455617 1132 ntBASIC18.18■□□□□ 0.5
SH2D4AQ9H788 AC007551.1-201ENST00000457394 519 ntBASIC18.18■□□□□ 0.5
SH2D4AQ9H788 AP001582.1-201ENST00000525856 295 ntBASIC18.18■□□□□ 0.5
SH2D4AQ9H788 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC18.18■□□□□ 0.5
SH2D4AQ9H788 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC18.18■□□□□ 0.5
SH2D4AQ9H788 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC18.18■□□□□ 0.5
SH2D4AQ9H788 UBL5-208ENST00000593087 320 ntTSL 3 BASIC18.18■□□□□ 0.5
SH2D4AQ9H788 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SH2D4AQ9H788 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SH2D4AQ9H788 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SH2D4AQ9H788 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SH2D4AQ9H788 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC18.18■□□□□ 0.5
SH2D4AQ9H788 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SH2D4AQ9H788 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SH2D4AQ9H788 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SH2D4AQ9H788 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC18.18■□□□□ 0.5
SH2D4AQ9H788 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
SH2D4AQ9H788 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SH2D4AQ9H788 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SH2D4AQ9H788 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC18.18■□□□□ 0.5
SH2D4AQ9H788 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
SH2D4AQ9H788 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC18.18■□□□□ 0.5
SH2D4AQ9H788 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
SH2D4AQ9H788 LINC02447-202ENST00000501888 2146 ntBASIC18.17■□□□□ 0.5
SH2D4AQ9H788 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SH2D4AQ9H788 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
SH2D4AQ9H788 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC18.17■□□□□ 0.5
SH2D4AQ9H788 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SH2D4AQ9H788 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
SH2D4AQ9H788 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
SH2D4AQ9H788 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC18.17■□□□□ 0.5
SH2D4AQ9H788 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC18.17■□□□□ 0.5
SH2D4AQ9H788 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SH2D4AQ9H788 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
SH2D4AQ9H788 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
SH2D4AQ9H788 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC18.17■□□□□ 0.5
SH2D4AQ9H788 USB1-202ENST00000423271 1217 ntTSL 2 BASIC18.17■□□□□ 0.5
SH2D4AQ9H788 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC18.17■□□□□ 0.5
SH2D4AQ9H788 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SH2D4AQ9H788 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC18.17■□□□□ 0.5
SH2D4AQ9H788 GAPDHP40-201ENST00000505218 1006 ntBASIC18.17■□□□□ 0.5
SH2D4AQ9H788 KRT18P25-201ENST00000508931 1278 ntBASIC18.17■□□□□ 0.5
SH2D4AQ9H788 MFF-223ENST00000524634 647 ntTSL 2 BASIC18.17■□□□□ 0.5
SH2D4AQ9H788 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SH2D4AQ9H788 AP000812.2-201ENST00000538934 718 ntBASIC18.17■□□□□ 0.5
SH2D4AQ9H788 AC079316.1-201ENST00000548397 411 ntBASIC18.17■□□□□ 0.5
SH2D4AQ9H788 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC18.17■□□□□ 0.5
SH2D4AQ9H788 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC18.17■□□□□ 0.5
SH2D4AQ9H788 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC18.17■□□□□ 0.5
SH2D4AQ9H788 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC18.17■□□□□ 0.5
SH2D4AQ9H788 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SH2D4AQ9H788 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC18.17■□□□□ 0.5
SH2D4AQ9H788 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
SH2D4AQ9H788 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC18.17■□□□□ 0.5
SH2D4AQ9H788 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC18.17■□□□□ 0.5
SH2D4AQ9H788 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SH2D4AQ9H788 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC18.17■□□□□ 0.5
SH2D4AQ9H788 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
SH2D4AQ9H788 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SH2D4AQ9H788 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SH2D4AQ9H788 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SH2D4AQ9H788 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
SH2D4AQ9H788 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC18.17■□□□□ 0.5
SH2D4AQ9H788 POLL-217ENST00000628479 1953 ntTSL 5 BASIC18.17■□□□□ 0.5
SH2D4AQ9H788 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
SH2D4AQ9H788 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SH2D4AQ9H788 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SH2D4AQ9H788 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SH2D4AQ9H788 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
SH2D4AQ9H788 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SH2D4AQ9H788 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
SH2D4AQ9H788 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms