Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC5.3□□□□□ -1.56
KRTAP4-3Q9BYR4 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC5.3□□□□□ -1.56
KRTAP4-3Q9BYR4 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
KRTAP4-3Q9BYR4 CYP2T1P-202ENST00000641596 2535 ntBASIC5.3□□□□□ -1.56
KRTAP4-3Q9BYR4 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
KRTAP4-3Q9BYR4 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
KRTAP4-3Q9BYR4 AC020916.1-201ENST00000587762 1774 ntBASIC5.3□□□□□ -1.56
KRTAP4-3Q9BYR4 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC5.3□□□□□ -1.56
KRTAP4-3Q9BYR4 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
KRTAP4-3Q9BYR4 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC5.3□□□□□ -1.56
KRTAP4-3Q9BYR4 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
KRTAP4-3Q9BYR4 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
KRTAP4-3Q9BYR4 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
KRTAP4-3Q9BYR4 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
KRTAP4-3Q9BYR4 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC5.3□□□□□ -1.56
KRTAP4-3Q9BYR4 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
KRTAP4-3Q9BYR4 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
KRTAP4-3Q9BYR4 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC5.3□□□□□ -1.56
KRTAP4-3Q9BYR4 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC5.3□□□□□ -1.56
KRTAP4-3Q9BYR4 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
KRTAP4-3Q9BYR4 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC5.3□□□□□ -1.56
KRTAP4-3Q9BYR4 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
KRTAP4-3Q9BYR4 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
KRTAP4-3Q9BYR4 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC5.3□□□□□ -1.56
KRTAP4-3Q9BYR4 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
KRTAP4-3Q9BYR4 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
KRTAP4-3Q9BYR4 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
KRTAP4-3Q9BYR4 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
KRTAP4-3Q9BYR4 FAM86MP-201ENST00000340703 885 ntBASIC5.3□□□□□ -1.56
KRTAP4-3Q9BYR4 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
KRTAP4-3Q9BYR4 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC5.3□□□□□ -1.56
KRTAP4-3Q9BYR4 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC5.3□□□□□ -1.56
KRTAP4-3Q9BYR4 PKIG-203ENST00000372887 769 ntTSL 3 BASIC5.3□□□□□ -1.56
KRTAP4-3Q9BYR4 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC5.3□□□□□ -1.56
KRTAP4-3Q9BYR4 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC5.3□□□□□ -1.56
KRTAP4-3Q9BYR4 MIR648-201ENST00000385046 94 ntBASIC5.3□□□□□ -1.56
KRTAP4-3Q9BYR4 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
KRTAP4-3Q9BYR4 C1QBPP1-201ENST00000400117 770 ntBASIC5.3□□□□□ -1.56
KRTAP4-3Q9BYR4 MPV17-208ENST00000405076 603 ntTSL 5 BASIC5.3□□□□□ -1.56
KRTAP4-3Q9BYR4 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
KRTAP4-3Q9BYR4 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
KRTAP4-3Q9BYR4 TOMM22P5-201ENST00000416399 439 ntBASIC5.3□□□□□ -1.56
KRTAP4-3Q9BYR4 AC134915.1-201ENST00000426461 574 ntBASIC5.3□□□□□ -1.56
KRTAP4-3Q9BYR4 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC5.3□□□□□ -1.56
KRTAP4-3Q9BYR4 AC026954.1-201ENST00000429771 1293 ntBASIC5.3□□□□□ -1.56
KRTAP4-3Q9BYR4 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC5.3□□□□□ -1.56
KRTAP4-3Q9BYR4 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC5.3□□□□□ -1.56
KRTAP4-3Q9BYR4 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
KRTAP4-3Q9BYR4 AC234783.1-201ENST00000441761 496 ntBASIC5.3□□□□□ -1.56
KRTAP4-3Q9BYR4 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC5.3□□□□□ -1.56
KRTAP4-3Q9BYR4 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
KRTAP4-3Q9BYR4 KRT223P-202ENST00000449164 1292 ntBASIC5.3□□□□□ -1.56
KRTAP4-3Q9BYR4 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC5.3□□□□□ -1.56
KRTAP4-3Q9BYR4 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC5.3□□□□□ -1.56
KRTAP4-3Q9BYR4 RHOA-206ENST00000454011 889 ntTSL 2 BASIC5.3□□□□□ -1.56
KRTAP4-3Q9BYR4 AL590640.2-201ENST00000457038 527 ntBASIC5.3□□□□□ -1.56
KRTAP4-3Q9BYR4 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC5.3□□□□□ -1.56
KRTAP4-3Q9BYR4 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC5.3□□□□□ -1.56
KRTAP4-3Q9BYR4 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC5.3□□□□□ -1.56
KRTAP4-3Q9BYR4 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC5.3□□□□□ -1.56
KRTAP4-3Q9BYR4 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC5.3□□□□□ -1.56
KRTAP4-3Q9BYR4 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC5.3□□□□□ -1.56
KRTAP4-3Q9BYR4 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
KRTAP4-3Q9BYR4 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC5.3□□□□□ -1.56
KRTAP4-3Q9BYR4 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC5.3□□□□□ -1.56
KRTAP4-3Q9BYR4 AC107373.2-201ENST00000607735 490 ntBASIC5.3□□□□□ -1.56
KRTAP4-3Q9BYR4 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
KRTAP4-3Q9BYR4 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
KRTAP4-3Q9BYR4 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC5.3□□□□□ -1.56
KRTAP4-3Q9BYR4 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC5.3□□□□□ -1.56
KRTAP4-3Q9BYR4 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC5.3□□□□□ -1.56
KRTAP4-3Q9BYR4 MIR6799-201ENST00000620297 69 ntBASIC5.3□□□□□ -1.56
KRTAP4-3Q9BYR4 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
KRTAP4-3Q9BYR4 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC5.3□□□□□ -1.56
KRTAP4-3Q9BYR4 COX11-210ENST00000639671 696 ntBASIC5.3□□□□□ -1.56
KRTAP4-3Q9BYR4 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC5.3□□□□□ -1.56
KRTAP4-3Q9BYR4 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
KRTAP4-3Q9BYR4 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
KRTAP4-3Q9BYR4 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
KRTAP4-3Q9BYR4 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC5.3□□□□□ -1.56
KRTAP4-3Q9BYR4 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC5.3□□□□□ -1.56
KRTAP4-3Q9BYR4 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC5.3□□□□□ -1.56
KRTAP4-3Q9BYR4 MFF-204ENST00000353339 2186 ntTSL 5 BASIC5.3□□□□□ -1.56
KRTAP4-3Q9BYR4 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
KRTAP4-3Q9BYR4 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC5.3□□□□□ -1.56
KRTAP4-3Q9BYR4 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC5.3□□□□□ -1.56
KRTAP4-3Q9BYR4 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
KRTAP4-3Q9BYR4 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC5.3□□□□□ -1.56
KRTAP4-3Q9BYR4 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
KRTAP4-3Q9BYR4 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
KRTAP4-3Q9BYR4 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
KRTAP4-3Q9BYR4 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC5.3□□□□□ -1.56
KRTAP4-3Q9BYR4 CICP11-201ENST00000434745 2827 ntBASIC5.3□□□□□ -1.56
KRTAP4-3Q9BYR4 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
KRTAP4-3Q9BYR4 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC5.3□□□□□ -1.56
KRTAP4-3Q9BYR4 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
KRTAP4-3Q9BYR4 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
KRTAP4-3Q9BYR4 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
KRTAP4-3Q9BYR4 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
KRTAP4-3Q9BYR4 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms