Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 TMA16-204ENST00000508268 608 ntTSL 2 BASIC15.4■□□□□ 0.06
COL25A1Q9BXS0 RPL18-205ENST00000549273 1036 ntTSL 2 BASIC15.4■□□□□ 0.06
COL25A1Q9BXS0 HERC2P11-201ENST00000562845 725 ntBASIC15.4■□□□□ 0.06
COL25A1Q9BXS0 AC007728.1-202ENST00000564510 787 ntTSL 3 BASIC15.4■□□□□ 0.06
COL25A1Q9BXS0 AC100756.2-201ENST00000569537 736 ntBASIC15.4■□□□□ 0.06
COL25A1Q9BXS0 AC007952.4-201ENST00000573866 637 ntBASIC15.4■□□□□ 0.06
COL25A1Q9BXS0 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC15.4■□□□□ 0.06
COL25A1Q9BXS0 FXYD3-204ENST00000603181 758 ntAPPRIS P1 TSL 3 BASIC15.4■□□□□ 0.06
COL25A1Q9BXS0 AC010976.2-201ENST00000609697 852 ntBASIC15.4■□□□□ 0.06
COL25A1Q9BXS0 AC244517.3-201ENST00000616254 1235 ntBASIC15.4■□□□□ 0.06
COL25A1Q9BXS0 NCS1-203ENST00000630865 1092 ntTSL 3 BASIC15.4■□□□□ 0.06
COL25A1Q9BXS0 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
COL25A1Q9BXS0 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
COL25A1Q9BXS0 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC15.4■□□□□ 0.06
COL25A1Q9BXS0 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
COL25A1Q9BXS0 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
COL25A1Q9BXS0 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
COL25A1Q9BXS0 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
COL25A1Q9BXS0 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
COL25A1Q9BXS0 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
COL25A1Q9BXS0 AL008638.4-201ENST00000624792 1315 ntBASIC15.4■□□□□ 0.06
COL25A1Q9BXS0 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC15.4■□□□□ 0.06
COL25A1Q9BXS0 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
COL25A1Q9BXS0 WIZP1-201ENST00000531444 2299 ntBASIC15.4■□□□□ 0.06
COL25A1Q9BXS0 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
COL25A1Q9BXS0 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
COL25A1Q9BXS0 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
COL25A1Q9BXS0 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC15.39■□□□□ 0.05
COL25A1Q9BXS0 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
COL25A1Q9BXS0 DNMT3L-204ENST00000628202 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
COL25A1Q9BXS0 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
COL25A1Q9BXS0 AC009053.2-201ENST00000563701 2365 ntBASIC15.39■□□□□ 0.05
COL25A1Q9BXS0 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
COL25A1Q9BXS0 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
COL25A1Q9BXS0 CALR3-201ENST00000269881 1292 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
COL25A1Q9BXS0 OR2K2-201ENST00000302681 1078 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
COL25A1Q9BXS0 OTOS-201ENST00000319460 566 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
COL25A1Q9BXS0 PPM1N-205ENST00000401705 771 ntTSL 3 BASIC15.39■□□□□ 0.05
COL25A1Q9BXS0 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC15.39■□□□□ 0.05
COL25A1Q9BXS0 CCL24-202ENST00000416943 585 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
COL25A1Q9BXS0 GUSBP10-201ENST00000417412 665 ntBASIC15.39■□□□□ 0.05
COL25A1Q9BXS0 FOXP4-AS1-202ENST00000432751 409 ntTSL 2 BASIC15.39■□□□□ 0.05
COL25A1Q9BXS0 AC013448.2-201ENST00000440341 787 ntTSL 5 BASIC15.39■□□□□ 0.05
COL25A1Q9BXS0 CAP2-207ENST00000493172 861 ntTSL 2 BASIC15.39■□□□□ 0.05
COL25A1Q9BXS0 AP000920.1-201ENST00000531824 344 ntBASIC15.39■□□□□ 0.05
COL25A1Q9BXS0 MYL6-215ENST00000549566 685 ntTSL 2 BASIC15.39■□□□□ 0.05
COL25A1Q9BXS0 AC005993.1-201ENST00000555581 397 ntTSL 5 BASIC15.39■□□□□ 0.05
COL25A1Q9BXS0 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
COL25A1Q9BXS0 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC15.39■□□□□ 0.05
COL25A1Q9BXS0 AC005154.1-232ENST00000582549 556 ntTSL 5 BASIC15.39■□□□□ 0.05
COL25A1Q9BXS0 AC005962.1-201ENST00000584100 773 ntBASIC15.39■□□□□ 0.05
COL25A1Q9BXS0 BIRC5-211ENST00000592734 386 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
COL25A1Q9BXS0 PCP2-202ENST00000598935 457 ntAPPRIS ALT2 TSL 3 BASIC15.39■□□□□ 0.05
COL25A1Q9BXS0 PLA2G4C-AS1-203ENST00000601950 454 ntTSL 3 BASIC15.39■□□□□ 0.05
COL25A1Q9BXS0 NEK4P3-201ENST00000604859 544 ntBASIC15.39■□□□□ 0.05
COL25A1Q9BXS0 CTSH-218ENST00000615999 972 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
COL25A1Q9BXS0 AC002472.3-201ENST00000640124 621 ntBASIC15.39■□□□□ 0.05
COL25A1Q9BXS0 AC116562.4-201ENST00000641316 2276 ntBASIC15.39■□□□□ 0.05
COL25A1Q9BXS0 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
COL25A1Q9BXS0 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC15.39■□□□□ 0.05
COL25A1Q9BXS0 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC15.39■□□□□ 0.05
COL25A1Q9BXS0 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
COL25A1Q9BXS0 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC15.39■□□□□ 0.05
COL25A1Q9BXS0 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
COL25A1Q9BXS0 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
COL25A1Q9BXS0 DHRS7-209ENST00000557185 1322 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
COL25A1Q9BXS0 AC007491.1-201ENST00000637560 1306 ntTSL 5 BASIC15.39■□□□□ 0.05
COL25A1Q9BXS0 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC15.39■□□□□ 0.05
COL25A1Q9BXS0 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
COL25A1Q9BXS0 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
COL25A1Q9BXS0 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
COL25A1Q9BXS0 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC15.38■□□□□ 0.05
COL25A1Q9BXS0 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC15.38■□□□□ 0.05
COL25A1Q9BXS0 AC244394.1-201ENST00000435000 1665 ntBASIC15.38■□□□□ 0.05
COL25A1Q9BXS0 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
COL25A1Q9BXS0 MED7-202ENST00000420343 1382 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
COL25A1Q9BXS0 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
COL25A1Q9BXS0 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
COL25A1Q9BXS0 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
COL25A1Q9BXS0 TCEAL5-201ENST00000372680 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
COL25A1Q9BXS0 MAPK3-204ENST00000395200 997 ntTSL 3 BASIC15.38■□□□□ 0.05
COL25A1Q9BXS0 RN7SKP109-201ENST00000410592 316 ntBASIC15.38■□□□□ 0.05
COL25A1Q9BXS0 AC010141.1-201ENST00000411585 623 ntBASIC15.38■□□□□ 0.05
COL25A1Q9BXS0 AC092570.1-201ENST00000414446 469 ntBASIC15.38■□□□□ 0.05
COL25A1Q9BXS0 LINC00483-202ENST00000419688 558 ntTSL 3 BASIC15.38■□□□□ 0.05
COL25A1Q9BXS0 SOD2-205ENST00000444946 917 ntTSL 2 BASIC15.38■□□□□ 0.05
COL25A1Q9BXS0 DMKN-229ENST00000467637 827 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
COL25A1Q9BXS0 MESTP3-201ENST00000503460 968 ntBASIC15.38■□□□□ 0.05
COL25A1Q9BXS0 AC093826.1-201ENST00000508655 993 ntBASIC15.38■□□□□ 0.05
COL25A1Q9BXS0 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC15.38■□□□□ 0.05
COL25A1Q9BXS0 AC078814.4-201ENST00000546650 327 ntBASIC15.38■□□□□ 0.05
COL25A1Q9BXS0 AC073896.4-201ENST00000553176 403 ntTSL 2 BASIC15.38■□□□□ 0.05
COL25A1Q9BXS0 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC15.38■□□□□ 0.05
COL25A1Q9BXS0 AC012174.1-201ENST00000562349 714 ntTSL 3 BASIC15.38■□□□□ 0.05
COL25A1Q9BXS0 HNRNPA1P16-201ENST00000575692 955 ntBASIC15.38■□□□□ 0.05
COL25A1Q9BXS0 KLKP1-202ENST00000597246 1125 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
COL25A1Q9BXS0 OR3A1-202ENST00000615105 966 ntBASIC15.38■□□□□ 0.05
COL25A1Q9BXS0 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
COL25A1Q9BXS0 LINC01165-201ENST00000445190 1623 ntBASIC15.38■□□□□ 0.05
COL25A1Q9BXS0 AC012317.2-201ENST00000623305 2251 ntBASIC15.38■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms