Protein–RNA interactions for Protein: Q9BT76

UPK3B, Uroplakin-3b, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BQ9BT76 AL035633.1-201ENST00000406139 838 ntBASIC10.98□□□□□ -0.65
UPK3BQ9BT76 HAUS4P1-201ENST00000406739 1145 ntBASIC10.98□□□□□ -0.65
UPK3BQ9BT76 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC10.98□□□□□ -0.65
UPK3BQ9BT76 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC10.98□□□□□ -0.65
UPK3BQ9BT76 AC114501.2-201ENST00000439631 535 ntBASIC10.98□□□□□ -0.65
UPK3BQ9BT76 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
UPK3BQ9BT76 SPTLC1P1-201ENST00000447199 261 ntBASIC10.98□□□□□ -0.65
UPK3BQ9BT76 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC10.98□□□□□ -0.65
UPK3BQ9BT76 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC10.98□□□□□ -0.65
UPK3BQ9BT76 COX20P2-201ENST00000452636 358 ntBASIC10.98□□□□□ -0.65
UPK3BQ9BT76 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC10.98□□□□□ -0.65
UPK3BQ9BT76 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC10.98□□□□□ -0.65
UPK3BQ9BT76 PTK7-212ENST00000476760 902 ntTSL 2 BASIC10.98□□□□□ -0.65
UPK3BQ9BT76 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC10.98□□□□□ -0.65
UPK3BQ9BT76 SERBP1P5-201ENST00000510079 1181 ntBASIC10.98□□□□□ -0.65
UPK3BQ9BT76 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC10.98□□□□□ -0.65
UPK3BQ9BT76 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC10.98□□□□□ -0.65
UPK3BQ9BT76 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC10.98□□□□□ -0.65
UPK3BQ9BT76 AC027307.3-201ENST00000594262 1100 ntBASIC10.98□□□□□ -0.65
UPK3BQ9BT76 AC008738.7-201ENST00000609744 511 ntBASIC10.98□□□□□ -0.65
UPK3BQ9BT76 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC10.98□□□□□ -0.65
UPK3BQ9BT76 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
UPK3BQ9BT76 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
UPK3BQ9BT76 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
UPK3BQ9BT76 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC10.98□□□□□ -0.65
UPK3BQ9BT76 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
UPK3BQ9BT76 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC10.98□□□□□ -0.65
UPK3BQ9BT76 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
UPK3BQ9BT76 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
UPK3BQ9BT76 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC10.98□□□□□ -0.65
UPK3BQ9BT76 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
UPK3BQ9BT76 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
UPK3BQ9BT76 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC10.98□□□□□ -0.65
UPK3BQ9BT76 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC10.98□□□□□ -0.65
UPK3BQ9BT76 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
UPK3BQ9BT76 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC10.98□□□□□ -0.65
UPK3BQ9BT76 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC10.98□□□□□ -0.65
UPK3BQ9BT76 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC10.98□□□□□ -0.65
UPK3BQ9BT76 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
UPK3BQ9BT76 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC10.98□□□□□ -0.65
UPK3BQ9BT76 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC10.98□□□□□ -0.65
UPK3BQ9BT76 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
UPK3BQ9BT76 AL136982.4-201ENST00000437689 1740 ntBASIC10.98□□□□□ -0.65
UPK3BQ9BT76 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC10.98□□□□□ -0.65
UPK3BQ9BT76 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
UPK3BQ9BT76 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC10.97□□□□□ -0.65
UPK3BQ9BT76 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC10.97□□□□□ -0.65
UPK3BQ9BT76 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
UPK3BQ9BT76 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
UPK3BQ9BT76 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
UPK3BQ9BT76 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
UPK3BQ9BT76 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
UPK3BQ9BT76 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC10.97□□□□□ -0.65
UPK3BQ9BT76 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
UPK3BQ9BT76 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
UPK3BQ9BT76 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC10.97□□□□□ -0.65
UPK3BQ9BT76 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
UPK3BQ9BT76 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
UPK3BQ9BT76 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC10.97□□□□□ -0.65
UPK3BQ9BT76 AC144831.1-201ENST00000573312 2656 ntBASIC10.97□□□□□ -0.65
UPK3BQ9BT76 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC10.97□□□□□ -0.65
UPK3BQ9BT76 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
UPK3BQ9BT76 PAUPAR-201ENST00000630360 2965 ntBASIC10.97□□□□□ -0.65
UPK3BQ9BT76 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
UPK3BQ9BT76 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
UPK3BQ9BT76 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
UPK3BQ9BT76 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
UPK3BQ9BT76 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC10.97□□□□□ -0.65
UPK3BQ9BT76 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
UPK3BQ9BT76 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
UPK3BQ9BT76 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC10.97□□□□□ -0.65
UPK3BQ9BT76 MIR661-201ENST00000384842 89 ntBASIC10.97□□□□□ -0.65
UPK3BQ9BT76 MIR648-201ENST00000385046 94 ntBASIC10.97□□□□□ -0.65
UPK3BQ9BT76 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC10.97□□□□□ -0.65
UPK3BQ9BT76 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC10.97□□□□□ -0.65
UPK3BQ9BT76 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
UPK3BQ9BT76 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
UPK3BQ9BT76 AC135586.1-201ENST00000539323 574 ntBASIC10.97□□□□□ -0.65
UPK3BQ9BT76 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC10.97□□□□□ -0.65
UPK3BQ9BT76 COQ9-214ENST00000567933 882 ntTSL 3 BASIC10.97□□□□□ -0.65
UPK3BQ9BT76 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC10.97□□□□□ -0.65
UPK3BQ9BT76 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
UPK3BQ9BT76 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
UPK3BQ9BT76 AC004233.3-201ENST00000607794 1269 ntBASIC10.97□□□□□ -0.65
UPK3BQ9BT76 AC074044.1-201ENST00000609673 707 ntBASIC10.97□□□□□ -0.65
UPK3BQ9BT76 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
UPK3BQ9BT76 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
UPK3BQ9BT76 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
UPK3BQ9BT76 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
UPK3BQ9BT76 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC10.97□□□□□ -0.65
UPK3BQ9BT76 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
UPK3BQ9BT76 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
UPK3BQ9BT76 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
UPK3BQ9BT76 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC10.97□□□□□ -0.65
UPK3BQ9BT76 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC10.97□□□□□ -0.65
UPK3BQ9BT76 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
UPK3BQ9BT76 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
UPK3BQ9BT76 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
UPK3BQ9BT76 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC10.97□□□□□ -0.65
UPK3BQ9BT76 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC10.97□□□□□ -0.65
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms