Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC15.4■□□□□ 0.06
NPAS2Q99743 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
NPAS2Q99743 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC15.4■□□□□ 0.06
NPAS2Q99743 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC15.4■□□□□ 0.06
NPAS2Q99743 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC15.4■□□□□ 0.06
NPAS2Q99743 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
NPAS2Q99743 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
NPAS2Q99743 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
NPAS2Q99743 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
NPAS2Q99743 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC15.4■□□□□ 0.06
NPAS2Q99743 TKT-202ENST00000423516 2075 ntTSL 2 BASIC15.4■□□□□ 0.06
NPAS2Q99743 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
NPAS2Q99743 LRRFIP1P1-201ENST00000498774 2246 ntBASIC15.4■□□□□ 0.06
NPAS2Q99743 AC005089.1-201ENST00000619486 2241 ntBASIC15.4■□□□□ 0.06
NPAS2Q99743 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC15.4■□□□□ 0.06
NPAS2Q99743 ILF3-AS1-201ENST00000591501 1983 ntBASIC15.4■□□□□ 0.06
NPAS2Q99743 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
NPAS2Q99743 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC15.4■□□□□ 0.06
NPAS2Q99743 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NPAS2Q99743 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
NPAS2Q99743 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
NPAS2Q99743 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NPAS2Q99743 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
NPAS2Q99743 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC15.39■□□□□ 0.05
NPAS2Q99743 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC15.39■□□□□ 0.05
NPAS2Q99743 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NPAS2Q99743 AL359258.3-201ENST00000622910 2331 ntBASIC15.39■□□□□ 0.05
NPAS2Q99743 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
NPAS2Q99743 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NPAS2Q99743 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NPAS2Q99743 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
NPAS2Q99743 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
NPAS2Q99743 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
NPAS2Q99743 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
NPAS2Q99743 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC15.39■□□□□ 0.05
NPAS2Q99743 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NPAS2Q99743 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NPAS2Q99743 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC15.39■□□□□ 0.05
NPAS2Q99743 PNMT-202ENST00000394246 821 ntTSL 2 BASIC15.39■□□□□ 0.05
NPAS2Q99743 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC15.39■□□□□ 0.05
NPAS2Q99743 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
NPAS2Q99743 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC15.39■□□□□ 0.05
NPAS2Q99743 AL138918.1-201ENST00000568306 659 ntBASIC15.39■□□□□ 0.05
NPAS2Q99743 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC15.39■□□□□ 0.05
NPAS2Q99743 LSM12-202ENST00000585388 942 ntTSL 3 BASIC15.39■□□□□ 0.05
NPAS2Q99743 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
NPAS2Q99743 SSH2-211ENST00000590153 570 ntTSL 4 BASIC15.39■□□□□ 0.05
NPAS2Q99743 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC15.39■□□□□ 0.05
NPAS2Q99743 AL365330.1-201ENST00000607459 531 ntBASIC15.39■□□□□ 0.05
NPAS2Q99743 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
NPAS2Q99743 ORC5-208ENST00000626700 344 ntTSL 3 BASIC15.39■□□□□ 0.05
NPAS2Q99743 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NPAS2Q99743 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC15.39■□□□□ 0.05
NPAS2Q99743 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC15.39■□□□□ 0.05
NPAS2Q99743 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
NPAS2Q99743 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC15.39■□□□□ 0.05
NPAS2Q99743 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
NPAS2Q99743 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
NPAS2Q99743 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
NPAS2Q99743 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
NPAS2Q99743 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
NPAS2Q99743 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NPAS2Q99743 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
NPAS2Q99743 LINC00528-201ENST00000600723 2160 ntBASIC15.39■□□□□ 0.05
NPAS2Q99743 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
NPAS2Q99743 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC15.39■□□□□ 0.05
NPAS2Q99743 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
NPAS2Q99743 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NPAS2Q99743 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
NPAS2Q99743 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NPAS2Q99743 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NPAS2Q99743 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
NPAS2Q99743 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC15.39■□□□□ 0.05
NPAS2Q99743 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NPAS2Q99743 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
NPAS2Q99743 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC15.39■□□□□ 0.05
NPAS2Q99743 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC15.39■□□□□ 0.05
NPAS2Q99743 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
NPAS2Q99743 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
NPAS2Q99743 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
NPAS2Q99743 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
NPAS2Q99743 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
NPAS2Q99743 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
NPAS2Q99743 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
NPAS2Q99743 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
NPAS2Q99743 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
NPAS2Q99743 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
NPAS2Q99743 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
NPAS2Q99743 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
NPAS2Q99743 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
NPAS2Q99743 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC15.38■□□□□ 0.05
NPAS2Q99743 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
NPAS2Q99743 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
NPAS2Q99743 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
NPAS2Q99743 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
NPAS2Q99743 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
NPAS2Q99743 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC15.38■□□□□ 0.05
NPAS2Q99743 KRT18P32-201ENST00000424695 1287 ntBASIC15.38■□□□□ 0.05
NPAS2Q99743 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC15.38■□□□□ 0.05
NPAS2Q99743 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms