Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
NR1H4Q96RI1 RIC1-204ENST00000418622 6658 ntTSL 5 BASIC14.81□□□□□ -0.04
NR1H4Q96RI1 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC14.81□□□□□ -0.04
NR1H4Q96RI1 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NR1H4Q96RI1 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC14.8□□□□□ -0.04
NR1H4Q96RI1 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NR1H4Q96RI1 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NR1H4Q96RI1 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
NR1H4Q96RI1 AC127383.1-201ENST00000444697 1800 ntBASIC14.8□□□□□ -0.04
NR1H4Q96RI1 AC073869.1-201ENST00000415574 2762 ntBASIC14.8□□□□□ -0.04
NR1H4Q96RI1 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC14.8□□□□□ -0.04
NR1H4Q96RI1 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
NR1H4Q96RI1 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
NR1H4Q96RI1 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NR1H4Q96RI1 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
NR1H4Q96RI1 MTHFR-210ENST00000641407 2387 ntBASIC14.8□□□□□ -0.04
NR1H4Q96RI1 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
NR1H4Q96RI1 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NR1H4Q96RI1 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
NR1H4Q96RI1 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NR1H4Q96RI1 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC14.8□□□□□ -0.04
NR1H4Q96RI1 LINC00982-205ENST00000420957 435 ntBASIC14.8□□□□□ -0.04
NR1H4Q96RI1 TMPOP1-202ENST00000424642 1267 ntBASIC14.8□□□□□ -0.04
NR1H4Q96RI1 AL645939.2-201ENST00000427340 991 ntBASIC14.8□□□□□ -0.04
NR1H4Q96RI1 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
NR1H4Q96RI1 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC14.8□□□□□ -0.04
NR1H4Q96RI1 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
NR1H4Q96RI1 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC14.8□□□□□ -0.04
NR1H4Q96RI1 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC14.8□□□□□ -0.04
NR1H4Q96RI1 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC14.8□□□□□ -0.04
NR1H4Q96RI1 AC011498.5-201ENST00000592027 486 ntBASIC14.8□□□□□ -0.04
NR1H4Q96RI1 AL592071.1-201ENST00000611956 408 ntBASIC14.8□□□□□ -0.04
NR1H4Q96RI1 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
NR1H4Q96RI1 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
NR1H4Q96RI1 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
NR1H4Q96RI1 CTBP1-AS2-206ENST00000581398 5652 ntBASIC14.8□□□□□ -0.04
NR1H4Q96RI1 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NR1H4Q96RI1 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
NR1H4Q96RI1 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
NR1H4Q96RI1 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
NR1H4Q96RI1 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC14.8□□□□□ -0.04
NR1H4Q96RI1 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NR1H4Q96RI1 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
NR1H4Q96RI1 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NR1H4Q96RI1 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
NR1H4Q96RI1 ZBTB47-201ENST00000232974 3781 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
NR1H4Q96RI1 LMBR1-201ENST00000353442 7997 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NR1H4Q96RI1 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
NR1H4Q96RI1 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
NR1H4Q96RI1 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
NR1H4Q96RI1 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC14.8□□□□□ -0.04
NR1H4Q96RI1 RGS9-210ENST00000635833 2308 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
NR1H4Q96RI1 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC14.8□□□□□ -0.04
NR1H4Q96RI1 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
NR1H4Q96RI1 BRSK2-202ENST00000382179 3576 ntTSL 2 BASIC14.79□□□□□ -0.04
NR1H4Q96RI1 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
NR1H4Q96RI1 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NR1H4Q96RI1 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
NR1H4Q96RI1 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC14.79□□□□□ -0.04
NR1H4Q96RI1 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
NR1H4Q96RI1 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC14.79□□□□□ -0.04
NR1H4Q96RI1 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NR1H4Q96RI1 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
NR1H4Q96RI1 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
NR1H4Q96RI1 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
NR1H4Q96RI1 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NR1H4Q96RI1 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
NR1H4Q96RI1 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
NR1H4Q96RI1 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NR1H4Q96RI1 UQCC1-204ENST00000374384 2201 ntTSL 2 BASIC14.79□□□□□ -0.04
NR1H4Q96RI1 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
NR1H4Q96RI1 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NR1H4Q96RI1 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC14.79□□□□□ -0.04
NR1H4Q96RI1 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NR1H4Q96RI1 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NR1H4Q96RI1 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NR1H4Q96RI1 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
NR1H4Q96RI1 RCN1P1-201ENST00000400413 996 ntBASIC14.79□□□□□ -0.04
NR1H4Q96RI1 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
NR1H4Q96RI1 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NR1H4Q96RI1 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
NR1H4Q96RI1 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
NR1H4Q96RI1 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
NR1H4Q96RI1 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
NR1H4Q96RI1 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC14.79□□□□□ -0.04
NR1H4Q96RI1 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
NR1H4Q96RI1 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC14.79□□□□□ -0.04
NR1H4Q96RI1 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
NR1H4Q96RI1 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC14.79□□□□□ -0.04
NR1H4Q96RI1 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
NR1H4Q96RI1 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC14.79□□□□□ -0.04
NR1H4Q96RI1 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NR1H4Q96RI1 AC015802.1-201ENST00000588104 1449 ntBASIC14.79□□□□□ -0.04
NR1H4Q96RI1 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
NR1H4Q96RI1 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC14.79□□□□□ -0.04
NR1H4Q96RI1 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC14.79□□□□□ -0.04
NR1H4Q96RI1 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
NR1H4Q96RI1 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
NR1H4Q96RI1 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
NR1H4Q96RI1 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 57.5 ms