Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TRIM47Q96LD4 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC18.3■□□□□ 0.52
TRIM47Q96LD4 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC18.3■□□□□ 0.52
TRIM47Q96LD4 FTH1P14-201ENST00000482930 551 ntBASIC18.3■□□□□ 0.52
TRIM47Q96LD4 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TRIM47Q96LD4 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC18.3■□□□□ 0.52
TRIM47Q96LD4 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC18.3■□□□□ 0.52
TRIM47Q96LD4 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC18.3■□□□□ 0.52
TRIM47Q96LD4 AC124283.3-201ENST00000570869 594 ntBASIC18.3■□□□□ 0.52
TRIM47Q96LD4 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
TRIM47Q96LD4 PPA1-206ENST00000625364 644 ntTSL 5 BASIC18.3■□□□□ 0.52
TRIM47Q96LD4 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC18.3■□□□□ 0.52
TRIM47Q96LD4 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRIM47Q96LD4 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRIM47Q96LD4 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRIM47Q96LD4 REXO1L8P-201ENST00000604378 1897 ntBASIC18.3■□□□□ 0.52
TRIM47Q96LD4 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC18.3■□□□□ 0.52
TRIM47Q96LD4 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRIM47Q96LD4 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC18.3■□□□□ 0.52
TRIM47Q96LD4 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRIM47Q96LD4 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRIM47Q96LD4 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRIM47Q96LD4 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TRIM47Q96LD4 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
TRIM47Q96LD4 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC18.29■□□□□ 0.52
TRIM47Q96LD4 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
TRIM47Q96LD4 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRIM47Q96LD4 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TRIM47Q96LD4 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TRIM47Q96LD4 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRIM47Q96LD4 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRIM47Q96LD4 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRIM47Q96LD4 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRIM47Q96LD4 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC18.29■□□□□ 0.52
TRIM47Q96LD4 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TRIM47Q96LD4 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
TRIM47Q96LD4 AC026954.1-201ENST00000429771 1293 ntBASIC18.29■□□□□ 0.52
TRIM47Q96LD4 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
TRIM47Q96LD4 AL355864.2-201ENST00000447420 863 ntBASIC18.29■□□□□ 0.52
TRIM47Q96LD4 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC18.29■□□□□ 0.52
TRIM47Q96LD4 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TRIM47Q96LD4 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRIM47Q96LD4 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC18.29■□□□□ 0.52
TRIM47Q96LD4 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC18.29■□□□□ 0.52
TRIM47Q96LD4 RN7SL190P-201ENST00000582519 257 ntBASIC18.29■□□□□ 0.52
TRIM47Q96LD4 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TRIM47Q96LD4 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC18.29■□□□□ 0.52
TRIM47Q96LD4 SPIB-207ENST00000597855 564 ntTSL 4 BASIC18.29■□□□□ 0.52
TRIM47Q96LD4 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
TRIM47Q96LD4 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC18.29■□□□□ 0.52
TRIM47Q96LD4 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TRIM47Q96LD4 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC18.29■□□□□ 0.52
TRIM47Q96LD4 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRIM47Q96LD4 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRIM47Q96LD4 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TRIM47Q96LD4 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TRIM47Q96LD4 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC18.29■□□□□ 0.52
TRIM47Q96LD4 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
TRIM47Q96LD4 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
TRIM47Q96LD4 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
TRIM47Q96LD4 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRIM47Q96LD4 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC18.28■□□□□ 0.52
TRIM47Q96LD4 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TRIM47Q96LD4 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
TRIM47Q96LD4 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC18.28■□□□□ 0.52
TRIM47Q96LD4 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TRIM47Q96LD4 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC18.28■□□□□ 0.52
TRIM47Q96LD4 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRIM47Q96LD4 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC18.28■□□□□ 0.52
TRIM47Q96LD4 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC18.28■□□□□ 0.52
TRIM47Q96LD4 AC024909.3-201ENST00000611513 2257 ntBASIC18.28■□□□□ 0.52
TRIM47Q96LD4 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRIM47Q96LD4 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC18.28■□□□□ 0.52
TRIM47Q96LD4 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRIM47Q96LD4 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRIM47Q96LD4 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TRIM47Q96LD4 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC18.28■□□□□ 0.52
TRIM47Q96LD4 AGER-203ENST00000375065 665 ntTSL 2 BASIC18.28■□□□□ 0.52
TRIM47Q96LD4 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC18.28■□□□□ 0.52
TRIM47Q96LD4 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRIM47Q96LD4 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TRIM47Q96LD4 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TRIM47Q96LD4 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TRIM47Q96LD4 KRT8P13-201ENST00000463294 1010 ntBASIC18.28■□□□□ 0.52
TRIM47Q96LD4 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC18.28■□□□□ 0.52
TRIM47Q96LD4 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC18.28■□□□□ 0.52
TRIM47Q96LD4 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC18.28■□□□□ 0.52
TRIM47Q96LD4 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC18.28■□□□□ 0.52
TRIM47Q96LD4 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC18.28■□□□□ 0.52
TRIM47Q96LD4 LGALS9C-215ENST00000584941 1104 ntTSL 5 BASIC18.28■□□□□ 0.52
TRIM47Q96LD4 MIR4321-201ENST00000592276 80 ntBASIC18.28■□□□□ 0.52
TRIM47Q96LD4 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
TRIM47Q96LD4 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC18.28■□□□□ 0.52
TRIM47Q96LD4 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.52
TRIM47Q96LD4 AC091271.1-201ENST00000611877 1162 ntBASIC18.28■□□□□ 0.52
TRIM47Q96LD4 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC18.28■□□□□ 0.52
TRIM47Q96LD4 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TRIM47Q96LD4 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRIM47Q96LD4 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC18.28■□□□□ 0.52
TRIM47Q96LD4 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms