Protein–RNA interactions for Protein: Q96FS4

SIPA1, Signal-induced proliferation-associated protein 1, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1Q96FS4 ZBTB12BP-201ENST00000314232 1122 ntBASIC15.68■□□□□ 0.1
SIPA1Q96FS4 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC15.68■□□□□ 0.1
SIPA1Q96FS4 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SIPA1Q96FS4 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
SIPA1Q96FS4 BRWD1P1-201ENST00000401091 371 ntBASIC15.68■□□□□ 0.1
SIPA1Q96FS4 C2orf27AP3-201ENST00000434123 579 ntBASIC15.68■□□□□ 0.1
SIPA1Q96FS4 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
SIPA1Q96FS4 AC022137.2-201ENST00000503482 481 ntBASIC15.68■□□□□ 0.1
SIPA1Q96FS4 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
SIPA1Q96FS4 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SIPA1Q96FS4 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC15.68■□□□□ 0.1
SIPA1Q96FS4 AC079316.1-201ENST00000548397 411 ntBASIC15.68■□□□□ 0.1
SIPA1Q96FS4 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC15.68■□□□□ 0.1
SIPA1Q96FS4 AC015910.1-201ENST00000579400 975 ntBASIC15.68■□□□□ 0.1
SIPA1Q96FS4 MIR4538-201ENST00000581377 78 ntBASIC15.68■□□□□ 0.1
SIPA1Q96FS4 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
SIPA1Q96FS4 AL354718.3-201ENST00000616414 581 ntBASIC15.68■□□□□ 0.1
SIPA1Q96FS4 CR382287.1-201ENST00000623954 586 ntBASIC15.68■□□□□ 0.1
SIPA1Q96FS4 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SIPA1Q96FS4 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SIPA1Q96FS4 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
SIPA1Q96FS4 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SIPA1Q96FS4 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
SIPA1Q96FS4 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SIPA1Q96FS4 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC15.68■□□□□ 0.1
SIPA1Q96FS4 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
SIPA1Q96FS4 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SIPA1Q96FS4 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SIPA1Q96FS4 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
SIPA1Q96FS4 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SIPA1Q96FS4 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
SIPA1Q96FS4 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
SIPA1Q96FS4 TUBB1P2-201ENST00000422712 1306 ntBASIC15.68■□□□□ 0.1
SIPA1Q96FS4 TUBB1P1-201ENST00000503144 1300 ntBASIC15.68■□□□□ 0.1
SIPA1Q96FS4 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC15.68■□□□□ 0.1
SIPA1Q96FS4 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC15.68■□□□□ 0.1
SIPA1Q96FS4 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC15.68■□□□□ 0.1
SIPA1Q96FS4 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC15.67■□□□□ 0.1
SIPA1Q96FS4 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SIPA1Q96FS4 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC15.67■□□□□ 0.1
SIPA1Q96FS4 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
SIPA1Q96FS4 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SIPA1Q96FS4 FLII-221ENST00000578558 2377 ntTSL 5 BASIC15.67■□□□□ 0.1
SIPA1Q96FS4 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
SIPA1Q96FS4 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
SIPA1Q96FS4 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC15.67■□□□□ 0.1
SIPA1Q96FS4 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC15.67■□□□□ 0.1
SIPA1Q96FS4 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SIPA1Q96FS4 AL355994.2-201ENST00000447882 704 ntBASIC15.67■□□□□ 0.1
SIPA1Q96FS4 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC15.67■□□□□ 0.1
SIPA1Q96FS4 FAM8A2P-201ENST00000528813 1142 ntBASIC15.67■□□□□ 0.1
SIPA1Q96FS4 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC15.67■□□□□ 0.1
SIPA1Q96FS4 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC15.67■□□□□ 0.1
SIPA1Q96FS4 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC15.67■□□□□ 0.1
SIPA1Q96FS4 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC15.67■□□□□ 0.1
SIPA1Q96FS4 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC15.67■□□□□ 0.1
SIPA1Q96FS4 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SIPA1Q96FS4 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC15.67■□□□□ 0.1
SIPA1Q96FS4 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SIPA1Q96FS4 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SIPA1Q96FS4 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC15.67■□□□□ 0.1
SIPA1Q96FS4 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SIPA1Q96FS4 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC15.67■□□□□ 0.1
SIPA1Q96FS4 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
SIPA1Q96FS4 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SIPA1Q96FS4 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SIPA1Q96FS4 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC15.67■□□□□ 0.1
SIPA1Q96FS4 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SIPA1Q96FS4 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SIPA1Q96FS4 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC15.66■□□□□ 0.1
SIPA1Q96FS4 PCDHA14-201ENST00000506751 2298 ntBASIC15.66■□□□□ 0.1
SIPA1Q96FS4 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
SIPA1Q96FS4 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
SIPA1Q96FS4 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SIPA1Q96FS4 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
SIPA1Q96FS4 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SIPA1Q96FS4 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
SIPA1Q96FS4 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SIPA1Q96FS4 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
SIPA1Q96FS4 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SIPA1Q96FS4 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
SIPA1Q96FS4 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
SIPA1Q96FS4 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SIPA1Q96FS4 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SIPA1Q96FS4 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
SIPA1Q96FS4 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
SIPA1Q96FS4 MIR1908-201ENST00000410394 80 ntBASIC15.66■□□□□ 0.1
SIPA1Q96FS4 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC15.66■□□□□ 0.1
SIPA1Q96FS4 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC15.66■□□□□ 0.1
SIPA1Q96FS4 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
SIPA1Q96FS4 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC15.66■□□□□ 0.1
SIPA1Q96FS4 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SIPA1Q96FS4 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SIPA1Q96FS4 NOP2-211ENST00000540228 668 ntTSL 2 BASIC15.66■□□□□ 0.1
SIPA1Q96FS4 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
SIPA1Q96FS4 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC15.66■□□□□ 0.1
SIPA1Q96FS4 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC15.66■□□□□ 0.1
SIPA1Q96FS4 KSR1-207ENST00000578981 748 ntTSL 4 BASIC15.66■□□□□ 0.1
SIPA1Q96FS4 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC15.66■□□□□ 0.1
SIPA1Q96FS4 MIR4313-201ENST00000580760 101 ntBASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms