Protein–RNA interactions for Protein: Q96FN4

CPNE2, Copine-2, humanhuman

Predicted RBP Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE2Q96FN4 AC105250.1-201ENST00000509378 2057 ntBASIC13.7□□□□□ -0.22
CPNE2Q96FN4 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CPNE2Q96FN4 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CPNE2Q96FN4 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
CPNE2Q96FN4 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
CPNE2Q96FN4 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CPNE2Q96FN4 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC13.7□□□□□ -0.22
CPNE2Q96FN4 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CPNE2Q96FN4 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CPNE2Q96FN4 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CPNE2Q96FN4 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CPNE2Q96FN4 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CPNE2Q96FN4 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CPNE2Q96FN4 REXO1L1P-202ENST00000608646 1974 ntBASIC13.69□□□□□ -0.22
CPNE2Q96FN4 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC13.69□□□□□ -0.22
CPNE2Q96FN4 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CPNE2Q96FN4 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
CPNE2Q96FN4 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CPNE2Q96FN4 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
CPNE2Q96FN4 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CPNE2Q96FN4 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CPNE2Q96FN4 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC13.69□□□□□ -0.22
CPNE2Q96FN4 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC13.69□□□□□ -0.22
CPNE2Q96FN4 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CPNE2Q96FN4 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CPNE2Q96FN4 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CPNE2Q96FN4 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
CPNE2Q96FN4 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
CPNE2Q96FN4 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CPNE2Q96FN4 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
CPNE2Q96FN4 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CPNE2Q96FN4 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC13.69□□□□□ -0.22
CPNE2Q96FN4 FAM220BP-201ENST00000377689 816 ntBASIC13.69□□□□□ -0.22
CPNE2Q96FN4 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CPNE2Q96FN4 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CPNE2Q96FN4 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CPNE2Q96FN4 LBH-204ENST00000406087 559 ntTSL 4 BASIC13.69□□□□□ -0.22
CPNE2Q96FN4 AC007967.2-201ENST00000432613 625 ntBASIC13.69□□□□□ -0.22
CPNE2Q96FN4 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC13.69□□□□□ -0.22
CPNE2Q96FN4 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC13.69□□□□□ -0.22
CPNE2Q96FN4 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC13.69□□□□□ -0.22
CPNE2Q96FN4 AL139010.1-201ENST00000454878 894 ntBASIC13.69□□□□□ -0.22
CPNE2Q96FN4 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
CPNE2Q96FN4 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC13.69□□□□□ -0.22
CPNE2Q96FN4 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC13.69□□□□□ -0.22
CPNE2Q96FN4 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC13.69□□□□□ -0.22
CPNE2Q96FN4 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC13.69□□□□□ -0.22
CPNE2Q96FN4 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC13.69□□□□□ -0.22
CPNE2Q96FN4 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC13.69□□□□□ -0.22
CPNE2Q96FN4 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC13.69□□□□□ -0.22
CPNE2Q96FN4 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC13.69□□□□□ -0.22
CPNE2Q96FN4 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
CPNE2Q96FN4 AC006486.2-201ENST00000624246 2199 ntBASIC13.69□□□□□ -0.22
CPNE2Q96FN4 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC13.69□□□□□ -0.22
CPNE2Q96FN4 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC13.69□□□□□ -0.22
CPNE2Q96FN4 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
CPNE2Q96FN4 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC13.69□□□□□ -0.22
CPNE2Q96FN4 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CPNE2Q96FN4 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CPNE2Q96FN4 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
CPNE2Q96FN4 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CPNE2Q96FN4 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CPNE2Q96FN4 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
CPNE2Q96FN4 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CPNE2Q96FN4 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC13.68□□□□□ -0.22
CPNE2Q96FN4 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC13.68□□□□□ -0.22
CPNE2Q96FN4 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CPNE2Q96FN4 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CPNE2Q96FN4 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
CPNE2Q96FN4 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC13.68□□□□□ -0.22
CPNE2Q96FN4 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
CPNE2Q96FN4 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
CPNE2Q96FN4 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CPNE2Q96FN4 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
CPNE2Q96FN4 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
CPNE2Q96FN4 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC13.68□□□□□ -0.22
CPNE2Q96FN4 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
CPNE2Q96FN4 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CPNE2Q96FN4 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC13.68□□□□□ -0.22
CPNE2Q96FN4 AL355306.1-201ENST00000415580 579 ntBASIC13.68□□□□□ -0.22
CPNE2Q96FN4 RPS8P6-201ENST00000426177 609 ntBASIC13.68□□□□□ -0.22
CPNE2Q96FN4 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC13.68□□□□□ -0.22
CPNE2Q96FN4 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC13.68□□□□□ -0.22
CPNE2Q96FN4 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC13.68□□□□□ -0.22
CPNE2Q96FN4 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC13.68□□□□□ -0.22
CPNE2Q96FN4 RPL13AP23-201ENST00000480739 586 ntBASIC13.68□□□□□ -0.22
CPNE2Q96FN4 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC13.68□□□□□ -0.22
CPNE2Q96FN4 CCDC74BP1-201ENST00000508880 1123 ntBASIC13.68□□□□□ -0.22
CPNE2Q96FN4 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC13.68□□□□□ -0.22
CPNE2Q96FN4 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC13.68□□□□□ -0.22
CPNE2Q96FN4 AL135744.1-201ENST00000565098 629 ntBASIC13.68□□□□□ -0.22
CPNE2Q96FN4 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC13.68□□□□□ -0.22
CPNE2Q96FN4 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC13.68□□□□□ -0.22
CPNE2Q96FN4 AC027307.2-201ENST00000591252 911 ntBASIC13.68□□□□□ -0.22
CPNE2Q96FN4 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC13.68□□□□□ -0.22
CPNE2Q96FN4 AL450472.2-201ENST00000603663 1156 ntBASIC13.68□□□□□ -0.22
CPNE2Q96FN4 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC13.68□□□□□ -0.22
CPNE2Q96FN4 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC13.68□□□□□ -0.22
CPNE2Q96FN4 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
CPNE2Q96FN4 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms