Protein–RNA interactions for Protein: Q96EP0

RNF31, E3 ubiquitin-protein ligase RNF31, humanhuman

Predictions only

Length 1,072 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF31Q96EP0 TTTY23B-201ENST00000442790 549 ntBASIC15.17■□□□□ 0.02
RNF31Q96EP0 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC15.17■□□□□ 0.02
RNF31Q96EP0 ZNF890P-202ENST00000530367 1156 ntBASIC15.17■□□□□ 0.02
RNF31Q96EP0 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC15.17■□□□□ 0.02
RNF31Q96EP0 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC15.17■□□□□ 0.02
RNF31Q96EP0 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC15.17■□□□□ 0.02
RNF31Q96EP0 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RNF31Q96EP0 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RNF31Q96EP0 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC15.17■□□□□ 0.02
RNF31Q96EP0 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC15.17■□□□□ 0.02
RNF31Q96EP0 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
RNF31Q96EP0 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
RNF31Q96EP0 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RNF31Q96EP0 AL592424.1-201ENST00000563624 1536 ntBASIC15.17■□□□□ 0.02
RNF31Q96EP0 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RNF31Q96EP0 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC15.17■□□□□ 0.02
RNF31Q96EP0 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC15.17■□□□□ 0.02
RNF31Q96EP0 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
RNF31Q96EP0 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
RNF31Q96EP0 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RNF31Q96EP0 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RNF31Q96EP0 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
RNF31Q96EP0 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
RNF31Q96EP0 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
RNF31Q96EP0 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
RNF31Q96EP0 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RNF31Q96EP0 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
RNF31Q96EP0 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RNF31Q96EP0 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC15.16■□□□□ 0.02
RNF31Q96EP0 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC15.16■□□□□ 0.02
RNF31Q96EP0 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
RNF31Q96EP0 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RNF31Q96EP0 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RNF31Q96EP0 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
RNF31Q96EP0 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC15.16■□□□□ 0.02
RNF31Q96EP0 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC15.16■□□□□ 0.02
RNF31Q96EP0 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RNF31Q96EP0 GPR53P-205ENST00000457298 1084 ntBASIC15.16■□□□□ 0.02
RNF31Q96EP0 FXR1-221ENST00000491674 365 ntTSL 2 BASIC15.16■□□□□ 0.02
RNF31Q96EP0 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
RNF31Q96EP0 FADS2-205ENST00000517839 469 ntTSL 3 BASIC15.16■□□□□ 0.02
RNF31Q96EP0 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
RNF31Q96EP0 TIMM17BP1-201ENST00000545713 516 ntBASIC15.16■□□□□ 0.02
RNF31Q96EP0 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC15.16■□□□□ 0.02
RNF31Q96EP0 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC15.16■□□□□ 0.02
RNF31Q96EP0 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC15.16■□□□□ 0.02
RNF31Q96EP0 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
RNF31Q96EP0 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RNF31Q96EP0 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RNF31Q96EP0 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RNF31Q96EP0 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC15.16■□□□□ 0.02
RNF31Q96EP0 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
RNF31Q96EP0 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC15.16■□□□□ 0.02
RNF31Q96EP0 NORAD-201ENST00000565493 5339 ntBASIC15.16■□□□□ 0.02
RNF31Q96EP0 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC15.16■□□□□ 0.02
RNF31Q96EP0 AL365203.3-201ENST00000609742 2057 ntBASIC15.16■□□□□ 0.02
RNF31Q96EP0 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
RNF31Q96EP0 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
RNF31Q96EP0 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
RNF31Q96EP0 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RNF31Q96EP0 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RNF31Q96EP0 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RNF31Q96EP0 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RNF31Q96EP0 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC15.16■□□□□ 0.02
RNF31Q96EP0 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RNF31Q96EP0 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC15.16■□□□□ 0.02
RNF31Q96EP0 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RNF31Q96EP0 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
RNF31Q96EP0 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC15.15■□□□□ 0.02
RNF31Q96EP0 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RNF31Q96EP0 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RNF31Q96EP0 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RNF31Q96EP0 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RNF31Q96EP0 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC15.15■□□□□ 0.02
RNF31Q96EP0 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RNF31Q96EP0 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
RNF31Q96EP0 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
RNF31Q96EP0 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RNF31Q96EP0 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC15.15■□□□□ 0.02
RNF31Q96EP0 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
RNF31Q96EP0 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
RNF31Q96EP0 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RNF31Q96EP0 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
RNF31Q96EP0 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
RNF31Q96EP0 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RNF31Q96EP0 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
RNF31Q96EP0 MIR658-201ENST00000385210 100 ntBASIC15.15■□□□□ 0.02
RNF31Q96EP0 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
RNF31Q96EP0 MIR1909-201ENST00000411312 80 ntBASIC15.15■□□□□ 0.02
RNF31Q96EP0 AC074338.1-201ENST00000416825 156 ntBASIC15.15■□□□□ 0.02
RNF31Q96EP0 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC15.15■□□□□ 0.02
RNF31Q96EP0 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC15.15■□□□□ 0.02
RNF31Q96EP0 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC15.15■□□□□ 0.02
RNF31Q96EP0 KRT17P8-201ENST00000540749 863 ntBASIC15.15■□□□□ 0.02
RNF31Q96EP0 COQ6-210ENST00000554920 649 ntTSL 3 BASIC15.15■□□□□ 0.02
RNF31Q96EP0 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC15.15■□□□□ 0.02
RNF31Q96EP0 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC15.15■□□□□ 0.02
RNF31Q96EP0 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
RNF31Q96EP0 AL365330.1-201ENST00000607459 531 ntBASIC15.15■□□□□ 0.02
RNF31Q96EP0 AC074044.1-201ENST00000609673 707 ntBASIC15.15■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms