Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC15.11■□□□□ 0.01
VPS33AQ96AX1 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC15.11■□□□□ 0.01
VPS33AQ96AX1 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC15.11■□□□□ 0.01
VPS33AQ96AX1 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
VPS33AQ96AX1 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
VPS33AQ96AX1 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
VPS33AQ96AX1 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
VPS33AQ96AX1 AC026396.1-201ENST00000419388 421 ntBASIC15.11■□□□□ 0.01
VPS33AQ96AX1 RPS8P6-201ENST00000426177 609 ntBASIC15.11■□□□□ 0.01
VPS33AQ96AX1 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC15.11■□□□□ 0.01
VPS33AQ96AX1 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC15.11■□□□□ 0.01
VPS33AQ96AX1 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC15.11■□□□□ 0.01
VPS33AQ96AX1 RNA5SP410-201ENST00000516285 106 ntBASIC15.11■□□□□ 0.01
VPS33AQ96AX1 AC112191.1-201ENST00000523689 701 ntBASIC15.11■□□□□ 0.01
VPS33AQ96AX1 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
VPS33AQ96AX1 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
VPS33AQ96AX1 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
VPS33AQ96AX1 AL662844.1-201ENST00000546340 181 ntBASIC15.11■□□□□ 0.01
VPS33AQ96AX1 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
VPS33AQ96AX1 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC15.11■□□□□ 0.01
VPS33AQ96AX1 COQ9-214ENST00000567933 882 ntTSL 3 BASIC15.11■□□□□ 0.01
VPS33AQ96AX1 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC15.11■□□□□ 0.01
VPS33AQ96AX1 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC15.11■□□□□ 0.01
VPS33AQ96AX1 AL450472.2-201ENST00000603663 1156 ntBASIC15.11■□□□□ 0.01
VPS33AQ96AX1 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC15.11■□□□□ 0.01
VPS33AQ96AX1 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC15.11■□□□□ 0.01
VPS33AQ96AX1 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
VPS33AQ96AX1 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
VPS33AQ96AX1 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
VPS33AQ96AX1 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
VPS33AQ96AX1 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
VPS33AQ96AX1 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
VPS33AQ96AX1 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
VPS33AQ96AX1 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC15.11■□□□□ 0.01
VPS33AQ96AX1 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
VPS33AQ96AX1 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
VPS33AQ96AX1 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
VPS33AQ96AX1 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC15.11■□□□□ 0.01
VPS33AQ96AX1 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
VPS33AQ96AX1 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
VPS33AQ96AX1 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC15.11■□□□□ 0.01
VPS33AQ96AX1 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
VPS33AQ96AX1 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC15.11■□□□□ 0.01
VPS33AQ96AX1 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
VPS33AQ96AX1 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
VPS33AQ96AX1 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC15.1■□□□□ 0.01
VPS33AQ96AX1 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
VPS33AQ96AX1 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC15.1■□□□□ 0.01
VPS33AQ96AX1 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
VPS33AQ96AX1 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
VPS33AQ96AX1 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
VPS33AQ96AX1 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
VPS33AQ96AX1 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
VPS33AQ96AX1 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC15.1■□□□□ 0.01
VPS33AQ96AX1 USP28-214ENST00000545540 3431 ntTSL 2 BASIC15.1■□□□□ 0.01
VPS33AQ96AX1 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
VPS33AQ96AX1 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC15.1■□□□□ 0.01
VPS33AQ96AX1 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
VPS33AQ96AX1 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
VPS33AQ96AX1 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
VPS33AQ96AX1 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
VPS33AQ96AX1 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
VPS33AQ96AX1 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
VPS33AQ96AX1 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC15.1■□□□□ 0.01
VPS33AQ96AX1 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
VPS33AQ96AX1 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
VPS33AQ96AX1 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
VPS33AQ96AX1 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
VPS33AQ96AX1 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
VPS33AQ96AX1 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC15.1■□□□□ 0.01
VPS33AQ96AX1 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
VPS33AQ96AX1 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC15.1■□□□□ 0.01
VPS33AQ96AX1 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC15.1■□□□□ 0.01
VPS33AQ96AX1 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC15.1■□□□□ 0.01
VPS33AQ96AX1 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC15.1■□□□□ 0.01
VPS33AQ96AX1 PENK-208ENST00000523051 772 ntTSL 5 BASIC15.1■□□□□ 0.01
VPS33AQ96AX1 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC15.1■□□□□ 0.01
VPS33AQ96AX1 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC15.1■□□□□ 0.01
VPS33AQ96AX1 KRT126P-201ENST00000549467 1181 ntBASIC15.1■□□□□ 0.01
VPS33AQ96AX1 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC15.1■□□□□ 0.01
VPS33AQ96AX1 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC15.1■□□□□ 0.01
VPS33AQ96AX1 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
VPS33AQ96AX1 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC15.1■□□□□ 0.01
VPS33AQ96AX1 AC027307.2-201ENST00000591252 911 ntBASIC15.1■□□□□ 0.01
VPS33AQ96AX1 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC15.1■□□□□ 0.01
VPS33AQ96AX1 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
VPS33AQ96AX1 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC15.1■□□□□ 0.01
VPS33AQ96AX1 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
VPS33AQ96AX1 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
VPS33AQ96AX1 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC15.1■□□□□ 0.01
VPS33AQ96AX1 FGD5P1-202ENST00000614866 2498 ntBASIC15.1■□□□□ 0.01
VPS33AQ96AX1 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
VPS33AQ96AX1 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
VPS33AQ96AX1 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
VPS33AQ96AX1 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
VPS33AQ96AX1 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
VPS33AQ96AX1 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
VPS33AQ96AX1 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
VPS33AQ96AX1 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
VPS33AQ96AX1 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms