Protein–RNA interactions for Protein: Q96A23

CPNE4, Copine-4, humanhuman

Predicted RBP Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4Q96A23 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CPNE4Q96A23 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CPNE4Q96A23 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC14.1□□□□□ -0.15
CPNE4Q96A23 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
CPNE4Q96A23 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CPNE4Q96A23 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CPNE4Q96A23 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
CPNE4Q96A23 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC14.1□□□□□ -0.15
CPNE4Q96A23 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC14.1□□□□□ -0.15
CPNE4Q96A23 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CPNE4Q96A23 AP005117.1-202ENST00000581724 1908 ntBASIC14.1□□□□□ -0.15
CPNE4Q96A23 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
CPNE4Q96A23 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC14.1□□□□□ -0.15
CPNE4Q96A23 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC14.1□□□□□ -0.15
CPNE4Q96A23 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
CPNE4Q96A23 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
CPNE4Q96A23 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CPNE4Q96A23 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CPNE4Q96A23 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CPNE4Q96A23 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
CPNE4Q96A23 AC087499.6-201ENST00000411576 835 ntBASIC14.1□□□□□ -0.15
CPNE4Q96A23 TOMM22P5-201ENST00000416399 439 ntBASIC14.1□□□□□ -0.15
CPNE4Q96A23 GOLGA6L11P-201ENST00000417252 1298 ntBASIC14.1□□□□□ -0.15
CPNE4Q96A23 DFFBP1-201ENST00000433250 979 ntBASIC14.1□□□□□ -0.15
CPNE4Q96A23 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC14.1□□□□□ -0.15
CPNE4Q96A23 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC14.1□□□□□ -0.15
CPNE4Q96A23 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC14.1□□□□□ -0.15
CPNE4Q96A23 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC14.1□□□□□ -0.15
CPNE4Q96A23 AC055876.2-201ENST00000531834 546 ntBASIC14.1□□□□□ -0.15
CPNE4Q96A23 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC14.1□□□□□ -0.15
CPNE4Q96A23 COQ6-210ENST00000554920 649 ntTSL 3 BASIC14.1□□□□□ -0.15
CPNE4Q96A23 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC14.1□□□□□ -0.15
CPNE4Q96A23 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC14.1□□□□□ -0.15
CPNE4Q96A23 AC138761.1-201ENST00000584393 385 ntBASIC14.1□□□□□ -0.15
CPNE4Q96A23 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
CPNE4Q96A23 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CPNE4Q96A23 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
CPNE4Q96A23 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CPNE4Q96A23 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC14.1□□□□□ -0.15
CPNE4Q96A23 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CPNE4Q96A23 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
CPNE4Q96A23 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CPNE4Q96A23 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
CPNE4Q96A23 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
CPNE4Q96A23 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC14.1□□□□□ -0.15
CPNE4Q96A23 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CPNE4Q96A23 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CPNE4Q96A23 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
CPNE4Q96A23 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CPNE4Q96A23 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC14.09□□□□□ -0.15
CPNE4Q96A23 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CPNE4Q96A23 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC14.09□□□□□ -0.15
CPNE4Q96A23 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC14.09□□□□□ -0.15
CPNE4Q96A23 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC14.09□□□□□ -0.15
CPNE4Q96A23 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
CPNE4Q96A23 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC14.09□□□□□ -0.15
CPNE4Q96A23 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC14.09□□□□□ -0.15
CPNE4Q96A23 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CPNE4Q96A23 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC14.09□□□□□ -0.15
CPNE4Q96A23 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CPNE4Q96A23 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CPNE4Q96A23 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
CPNE4Q96A23 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
CPNE4Q96A23 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CPNE4Q96A23 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CPNE4Q96A23 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC14.09□□□□□ -0.15
CPNE4Q96A23 AL353779.1-201ENST00000434793 351 ntBASIC14.09□□□□□ -0.15
CPNE4Q96A23 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
CPNE4Q96A23 RHOA-206ENST00000454011 889 ntTSL 2 BASIC14.09□□□□□ -0.15
CPNE4Q96A23 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CPNE4Q96A23 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC14.09□□□□□ -0.15
CPNE4Q96A23 RRP7BP-205ENST00000566851 833 ntBASIC14.09□□□□□ -0.15
CPNE4Q96A23 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC14.09□□□□□ -0.15
CPNE4Q96A23 AL132655.2-201ENST00000596276 594 ntBASIC14.09□□□□□ -0.15
CPNE4Q96A23 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC14.09□□□□□ -0.15
CPNE4Q96A23 AF228730.6-201ENST00000641497 218 ntBASIC14.09□□□□□ -0.15
CPNE4Q96A23 AC084121.3-201ENST00000641716 218 ntBASIC14.09□□□□□ -0.15
CPNE4Q96A23 AC138969.3-201ENST00000546612 1459 ntBASIC14.09□□□□□ -0.15
CPNE4Q96A23 AC138932.2-201ENST00000548268 1459 ntBASIC14.09□□□□□ -0.15
CPNE4Q96A23 AC126755.4-201ENST00000549796 1459 ntBASIC14.09□□□□□ -0.15
CPNE4Q96A23 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CPNE4Q96A23 AC022188.1-201ENST00000620960 1664 ntBASIC14.09□□□□□ -0.15
CPNE4Q96A23 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CPNE4Q96A23 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CPNE4Q96A23 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CPNE4Q96A23 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC14.09□□□□□ -0.15
CPNE4Q96A23 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CPNE4Q96A23 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
CPNE4Q96A23 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CPNE4Q96A23 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CPNE4Q96A23 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
CPNE4Q96A23 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CPNE4Q96A23 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CPNE4Q96A23 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC14.09□□□□□ -0.15
CPNE4Q96A23 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC14.08□□□□□ -0.15
CPNE4Q96A23 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
CPNE4Q96A23 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.15
CPNE4Q96A23 LOX-206ENST00000639739 1626 ntTSL 5 BASIC14.08□□□□□ -0.15
CPNE4Q96A23 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC14.08□□□□□ -0.15
CPNE4Q96A23 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms