Protein–RNA interactions for Protein: Q969K3

RNF34, E3 ubiquitin-protein ligase RNF34, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF34Q969K3 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RNF34Q969K3 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RNF34Q969K3 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC16.41■□□□□ 0.22
RNF34Q969K3 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
RNF34Q969K3 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC16.41■□□□□ 0.22
RNF34Q969K3 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC16.41■□□□□ 0.22
RNF34Q969K3 KLK8-202ENST00000320838 456 ntTSL 5 BASIC16.41■□□□□ 0.22
RNF34Q969K3 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RNF34Q969K3 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RNF34Q969K3 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RNF34Q969K3 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RNF34Q969K3 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC16.41■□□□□ 0.22
RNF34Q969K3 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RNF34Q969K3 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
RNF34Q969K3 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC16.41■□□□□ 0.22
RNF34Q969K3 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC16.41■□□□□ 0.22
RNF34Q969K3 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
RNF34Q969K3 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC16.41■□□□□ 0.22
RNF34Q969K3 LINC02560-201ENST00000596379 459 ntBASIC16.41■□□□□ 0.22
RNF34Q969K3 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RNF34Q969K3 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC16.41■□□□□ 0.22
RNF34Q969K3 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RNF34Q969K3 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RNF34Q969K3 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RNF34Q969K3 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
RNF34Q969K3 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC16.41■□□□□ 0.22
RNF34Q969K3 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RNF34Q969K3 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
RNF34Q969K3 FUK-207ENST00000571514 3054 ntTSL 2 BASIC16.41■□□□□ 0.22
RNF34Q969K3 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RNF34Q969K3 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC16.41■□□□□ 0.22
RNF34Q969K3 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC16.41■□□□□ 0.22
RNF34Q969K3 TKT-202ENST00000423516 2075 ntTSL 2 BASIC16.41■□□□□ 0.22
RNF34Q969K3 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RNF34Q969K3 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RNF34Q969K3 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RNF34Q969K3 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC16.4■□□□□ 0.22
RNF34Q969K3 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RNF34Q969K3 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
RNF34Q969K3 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
RNF34Q969K3 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RNF34Q969K3 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
RNF34Q969K3 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RNF34Q969K3 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
RNF34Q969K3 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
RNF34Q969K3 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC16.4■□□□□ 0.22
RNF34Q969K3 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RNF34Q969K3 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
RNF34Q969K3 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RNF34Q969K3 SPDYE19P-201ENST00000338590 713 ntBASIC16.4■□□□□ 0.22
RNF34Q969K3 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RNF34Q969K3 AC236430.1-201ENST00000402231 743 ntBASIC16.4■□□□□ 0.22
RNF34Q969K3 OSM-203ENST00000403463 464 ntTSL 3 BASIC16.4■□□□□ 0.22
RNF34Q969K3 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC16.4■□□□□ 0.22
RNF34Q969K3 RASL12-203ENST00000434605 982 ntTSL 2 BASIC16.4■□□□□ 0.22
RNF34Q969K3 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
RNF34Q969K3 SERBP1P5-201ENST00000510079 1181 ntBASIC16.4■□□□□ 0.22
RNF34Q969K3 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RNF34Q969K3 SLED1-202ENST00000512051 380 ntBASIC16.4■□□□□ 0.22
RNF34Q969K3 DOC2GP-202ENST00000514950 1163 ntBASIC16.4■□□□□ 0.22
RNF34Q969K3 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RNF34Q969K3 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RNF34Q969K3 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC16.4■□□□□ 0.22
RNF34Q969K3 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RNF34Q969K3 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
RNF34Q969K3 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RNF34Q969K3 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC16.4■□□□□ 0.22
RNF34Q969K3 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC16.4■□□□□ 0.22
RNF34Q969K3 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
RNF34Q969K3 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
RNF34Q969K3 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RNF34Q969K3 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
RNF34Q969K3 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC16.4■□□□□ 0.22
RNF34Q969K3 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RNF34Q969K3 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
RNF34Q969K3 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
RNF34Q969K3 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
RNF34Q969K3 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RNF34Q969K3 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC16.4■□□□□ 0.22
RNF34Q969K3 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC16.4■□□□□ 0.22
RNF34Q969K3 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RNF34Q969K3 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
RNF34Q969K3 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC16.39■□□□□ 0.21
RNF34Q969K3 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RNF34Q969K3 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RNF34Q969K3 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RNF34Q969K3 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RNF34Q969K3 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RNF34Q969K3 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RNF34Q969K3 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.21
RNF34Q969K3 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC16.39■□□□□ 0.21
RNF34Q969K3 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC16.39■□□□□ 0.21
RNF34Q969K3 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC16.39■□□□□ 0.21
RNF34Q969K3 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RNF34Q969K3 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC16.39■□□□□ 0.21
RNF34Q969K3 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
RNF34Q969K3 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
RNF34Q969K3 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC16.39■□□□□ 0.21
RNF34Q969K3 AC074338.1-201ENST00000416825 156 ntBASIC16.39■□□□□ 0.21
RNF34Q969K3 AC002472.2-201ENST00000442739 958 ntBASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 93 ms