Protein–RNA interactions for Protein: Q8WVM7

STAG1, Cohesin subunit SA-1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
STAG1Q8WVM7 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC18.36■□□□□ 0.53
STAG1Q8WVM7 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC18.36■□□□□ 0.53
STAG1Q8WVM7 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC18.36■□□□□ 0.53
STAG1Q8WVM7 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
STAG1Q8WVM7 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
STAG1Q8WVM7 AL645728.2-202ENST00000641679 227 ntBASIC18.36■□□□□ 0.53
STAG1Q8WVM7 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
STAG1Q8WVM7 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
STAG1Q8WVM7 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
STAG1Q8WVM7 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
STAG1Q8WVM7 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
STAG1Q8WVM7 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
STAG1Q8WVM7 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
STAG1Q8WVM7 GSN-206ENST00000394353 2311 ntTSL 2 BASIC18.35■□□□□ 0.53
STAG1Q8WVM7 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
STAG1Q8WVM7 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
STAG1Q8WVM7 AC112693.3-201ENST00000624819 1983 ntBASIC18.35■□□□□ 0.53
STAG1Q8WVM7 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
STAG1Q8WVM7 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
STAG1Q8WVM7 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
STAG1Q8WVM7 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC18.35■□□□□ 0.53
STAG1Q8WVM7 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
STAG1Q8WVM7 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
STAG1Q8WVM7 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
STAG1Q8WVM7 HNRNPA1P48-201ENST00000562726 1377 ntBASIC18.35■□□□□ 0.53
STAG1Q8WVM7 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
STAG1Q8WVM7 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
STAG1Q8WVM7 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC18.35■□□□□ 0.53
STAG1Q8WVM7 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC18.35■□□□□ 0.53
STAG1Q8WVM7 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
STAG1Q8WVM7 AC134915.1-201ENST00000426461 574 ntBASIC18.35■□□□□ 0.53
STAG1Q8WVM7 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
STAG1Q8WVM7 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC18.35■□□□□ 0.53
STAG1Q8WVM7 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC18.35■□□□□ 0.53
STAG1Q8WVM7 HNRNPA1P13-201ENST00000510646 963 ntBASIC18.35■□□□□ 0.53
STAG1Q8WVM7 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC18.35■□□□□ 0.53
STAG1Q8WVM7 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC18.35■□□□□ 0.53
STAG1Q8WVM7 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC18.35■□□□□ 0.53
STAG1Q8WVM7 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC18.35■□□□□ 0.53
STAG1Q8WVM7 AC107373.2-201ENST00000607735 490 ntBASIC18.35■□□□□ 0.53
STAG1Q8WVM7 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC18.35■□□□□ 0.53
STAG1Q8WVM7 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
STAG1Q8WVM7 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
STAG1Q8WVM7 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
STAG1Q8WVM7 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
STAG1Q8WVM7 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
STAG1Q8WVM7 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
STAG1Q8WVM7 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
STAG1Q8WVM7 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC18.35■□□□□ 0.53
STAG1Q8WVM7 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
STAG1Q8WVM7 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC18.35■□□□□ 0.53
STAG1Q8WVM7 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
STAG1Q8WVM7 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
STAG1Q8WVM7 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
STAG1Q8WVM7 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
STAG1Q8WVM7 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
STAG1Q8WVM7 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
STAG1Q8WVM7 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC18.34■□□□□ 0.53
STAG1Q8WVM7 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
STAG1Q8WVM7 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
STAG1Q8WVM7 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
STAG1Q8WVM7 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
STAG1Q8WVM7 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
STAG1Q8WVM7 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC18.34■□□□□ 0.53
STAG1Q8WVM7 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
STAG1Q8WVM7 API5-202ENST00000420461 2009 ntTSL 2 BASIC18.34■□□□□ 0.53
STAG1Q8WVM7 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
STAG1Q8WVM7 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
STAG1Q8WVM7 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
STAG1Q8WVM7 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
STAG1Q8WVM7 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
STAG1Q8WVM7 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
STAG1Q8WVM7 U91328.1-201ENST00000437528 223 ntBASIC18.34■□□□□ 0.53
STAG1Q8WVM7 RN7SL837P-201ENST00000463010 287 ntBASIC18.34■□□□□ 0.53
STAG1Q8WVM7 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC18.34■□□□□ 0.53
STAG1Q8WVM7 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC18.34■□□□□ 0.53
STAG1Q8WVM7 PAM16-204ENST00000571941 674 ntTSL 3 BASIC18.34■□□□□ 0.53
STAG1Q8WVM7 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC18.34■□□□□ 0.53
STAG1Q8WVM7 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC18.34■□□□□ 0.53
STAG1Q8WVM7 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC18.34■□□□□ 0.53
STAG1Q8WVM7 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC18.34■□□□□ 0.53
STAG1Q8WVM7 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
STAG1Q8WVM7 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC18.34■□□□□ 0.53
STAG1Q8WVM7 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC18.34■□□□□ 0.53
STAG1Q8WVM7 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
STAG1Q8WVM7 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC18.34■□□□□ 0.53
STAG1Q8WVM7 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
STAG1Q8WVM7 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
STAG1Q8WVM7 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
STAG1Q8WVM7 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC18.34■□□□□ 0.53
STAG1Q8WVM7 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC18.34■□□□□ 0.53
STAG1Q8WVM7 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
STAG1Q8WVM7 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
STAG1Q8WVM7 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC18.33■□□□□ 0.53
STAG1Q8WVM7 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
STAG1Q8WVM7 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC18.33■□□□□ 0.53
STAG1Q8WVM7 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC18.33■□□□□ 0.53
STAG1Q8WVM7 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
STAG1Q8WVM7 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
STAG1Q8WVM7 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms