Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SHROOM3Q8TF72 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC15.91■□□□□ 0.14
SHROOM3Q8TF72 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC15.91■□□□□ 0.14
SHROOM3Q8TF72 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC15.91■□□□□ 0.14
SHROOM3Q8TF72 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
SHROOM3Q8TF72 AL359258.3-201ENST00000622910 2331 ntBASIC15.91■□□□□ 0.14
SHROOM3Q8TF72 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SHROOM3Q8TF72 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC15.91■□□□□ 0.14
SHROOM3Q8TF72 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
SHROOM3Q8TF72 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
SHROOM3Q8TF72 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
SHROOM3Q8TF72 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC15.91■□□□□ 0.14
SHROOM3Q8TF72 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC15.91■□□□□ 0.14
SHROOM3Q8TF72 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC15.91■□□□□ 0.14
SHROOM3Q8TF72 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SHROOM3Q8TF72 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SHROOM3Q8TF72 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SHROOM3Q8TF72 CICP11-201ENST00000434745 2827 ntBASIC15.9■□□□□ 0.14
SHROOM3Q8TF72 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC15.9■□□□□ 0.14
SHROOM3Q8TF72 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC15.9■□□□□ 0.14
SHROOM3Q8TF72 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SHROOM3Q8TF72 AC004945.1-201ENST00000416738 983 ntBASIC15.9■□□□□ 0.14
SHROOM3Q8TF72 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC15.9■□□□□ 0.14
SHROOM3Q8TF72 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC15.9■□□□□ 0.14
SHROOM3Q8TF72 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC15.9■□□□□ 0.14
SHROOM3Q8TF72 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC15.9■□□□□ 0.14
SHROOM3Q8TF72 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC15.9■□□□□ 0.14
SHROOM3Q8TF72 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC15.9■□□□□ 0.14
SHROOM3Q8TF72 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC15.9■□□□□ 0.14
SHROOM3Q8TF72 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
SHROOM3Q8TF72 AC023157.3-201ENST00000619086 2088 ntBASIC15.9■□□□□ 0.14
SHROOM3Q8TF72 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
SHROOM3Q8TF72 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
SHROOM3Q8TF72 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SHROOM3Q8TF72 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
SHROOM3Q8TF72 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
SHROOM3Q8TF72 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC15.9■□□□□ 0.14
SHROOM3Q8TF72 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
SHROOM3Q8TF72 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SHROOM3Q8TF72 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC15.9■□□□□ 0.14
SHROOM3Q8TF72 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SHROOM3Q8TF72 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC15.9■□□□□ 0.14
SHROOM3Q8TF72 AMT-232ENST00000636199 1546 ntTSL 5 BASIC15.9■□□□□ 0.14
SHROOM3Q8TF72 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SHROOM3Q8TF72 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
SHROOM3Q8TF72 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.14
SHROOM3Q8TF72 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SHROOM3Q8TF72 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SHROOM3Q8TF72 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SHROOM3Q8TF72 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
SHROOM3Q8TF72 GALT-202ENST00000450095 1280 ntTSL 2 BASIC15.89■□□□□ 0.13
SHROOM3Q8TF72 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC15.89■□□□□ 0.13
SHROOM3Q8TF72 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC15.89■□□□□ 0.13
SHROOM3Q8TF72 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SHROOM3Q8TF72 KRT8P44-201ENST00000441609 1350 ntBASIC15.89■□□□□ 0.13
SHROOM3Q8TF72 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
SHROOM3Q8TF72 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SHROOM3Q8TF72 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC15.89■□□□□ 0.13
SHROOM3Q8TF72 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SHROOM3Q8TF72 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SHROOM3Q8TF72 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SHROOM3Q8TF72 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC15.89■□□□□ 0.13
SHROOM3Q8TF72 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
SHROOM3Q8TF72 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SHROOM3Q8TF72 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC15.89■□□□□ 0.13
SHROOM3Q8TF72 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC15.89■□□□□ 0.13
SHROOM3Q8TF72 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SHROOM3Q8TF72 AC126365.1-201ENST00000578585 1514 ntBASIC15.89■□□□□ 0.13
SHROOM3Q8TF72 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SHROOM3Q8TF72 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SHROOM3Q8TF72 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SHROOM3Q8TF72 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SHROOM3Q8TF72 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SHROOM3Q8TF72 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
SHROOM3Q8TF72 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
SHROOM3Q8TF72 RPL13P2-201ENST00000440687 659 ntBASIC15.89■□□□□ 0.13
SHROOM3Q8TF72 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC15.89■□□□□ 0.13
SHROOM3Q8TF72 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SHROOM3Q8TF72 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC15.89■□□□□ 0.13
SHROOM3Q8TF72 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC15.89■□□□□ 0.13
SHROOM3Q8TF72 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC15.89■□□□□ 0.13
SHROOM3Q8TF72 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC15.89■□□□□ 0.13
SHROOM3Q8TF72 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
SHROOM3Q8TF72 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC15.89■□□□□ 0.13
SHROOM3Q8TF72 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC15.89■□□□□ 0.13
SHROOM3Q8TF72 AGAP7P-201ENST00000582299 2062 ntBASIC15.89■□□□□ 0.13
SHROOM3Q8TF72 AGAP14-201ENST00000624701 2060 ntBASIC15.89■□□□□ 0.13
SHROOM3Q8TF72 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SHROOM3Q8TF72 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SHROOM3Q8TF72 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SHROOM3Q8TF72 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC15.89■□□□□ 0.13
SHROOM3Q8TF72 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SHROOM3Q8TF72 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
SHROOM3Q8TF72 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
SHROOM3Q8TF72 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SHROOM3Q8TF72 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SHROOM3Q8TF72 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SHROOM3Q8TF72 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC15.88■□□□□ 0.13
SHROOM3Q8TF72 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SHROOM3Q8TF72 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 69.3 ms