Protein–RNA interactions for Protein: Q8NE63

HIPK4, Homeodomain-interacting protein kinase 4, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK4Q8NE63 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
HIPK4Q8NE63 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HIPK4Q8NE63 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC15.31■□□□□ 0.04
HIPK4Q8NE63 RPS2P28-201ENST00000314255 741 ntBASIC15.31■□□□□ 0.04
HIPK4Q8NE63 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
HIPK4Q8NE63 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC15.31■□□□□ 0.04
HIPK4Q8NE63 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
HIPK4Q8NE63 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC15.31■□□□□ 0.04
HIPK4Q8NE63 ATP6V0CP3-201ENST00000417255 467 ntBASIC15.31■□□□□ 0.04
HIPK4Q8NE63 AC018712.1-201ENST00000455767 687 ntBASIC15.31■□□□□ 0.04
HIPK4Q8NE63 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC15.31■□□□□ 0.04
HIPK4Q8NE63 AL031055.1-201ENST00000606362 631 ntBASIC15.31■□□□□ 0.04
HIPK4Q8NE63 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
HIPK4Q8NE63 AC012313.10-201ENST00000623509 926 ntBASIC15.31■□□□□ 0.04
HIPK4Q8NE63 AC004790.2-201ENST00000623588 572 ntBASIC15.31■□□□□ 0.04
HIPK4Q8NE63 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC15.31■□□□□ 0.04
HIPK4Q8NE63 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HIPK4Q8NE63 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
HIPK4Q8NE63 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC15.31■□□□□ 0.04
HIPK4Q8NE63 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
HIPK4Q8NE63 AP002414.3-201ENST00000589352 1468 ntBASIC15.31■□□□□ 0.04
HIPK4Q8NE63 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
HIPK4Q8NE63 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC15.31■□□□□ 0.04
HIPK4Q8NE63 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC15.31■□□□□ 0.04
HIPK4Q8NE63 AC011477.6-201ENST00000604980 1927 ntBASIC15.31■□□□□ 0.04
HIPK4Q8NE63 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HIPK4Q8NE63 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
HIPK4Q8NE63 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC15.31■□□□□ 0.04
HIPK4Q8NE63 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HIPK4Q8NE63 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC15.3■□□□□ 0.04
HIPK4Q8NE63 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
HIPK4Q8NE63 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HIPK4Q8NE63 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
HIPK4Q8NE63 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
HIPK4Q8NE63 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HIPK4Q8NE63 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HIPK4Q8NE63 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
HIPK4Q8NE63 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HIPK4Q8NE63 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC15.3■□□□□ 0.04
HIPK4Q8NE63 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC15.3■□□□□ 0.04
HIPK4Q8NE63 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC15.3■□□□□ 0.04
HIPK4Q8NE63 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
HIPK4Q8NE63 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
HIPK4Q8NE63 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
HIPK4Q8NE63 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HIPK4Q8NE63 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC15.3■□□□□ 0.04
HIPK4Q8NE63 VMO1-203ENST00000416307 712 ntTSL 2 BASIC15.3■□□□□ 0.04
HIPK4Q8NE63 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC15.3■□□□□ 0.04
HIPK4Q8NE63 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC15.3■□□□□ 0.04
HIPK4Q8NE63 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC15.3■□□□□ 0.04
HIPK4Q8NE63 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC15.3■□□□□ 0.04
HIPK4Q8NE63 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
HIPK4Q8NE63 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC15.3■□□□□ 0.04
HIPK4Q8NE63 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC15.3■□□□□ 0.04
HIPK4Q8NE63 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HIPK4Q8NE63 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC15.3■□□□□ 0.04
HIPK4Q8NE63 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
HIPK4Q8NE63 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
HIPK4Q8NE63 TP73-AS1-207ENST00000624167 988 ntBASIC15.3■□□□□ 0.04
HIPK4Q8NE63 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
HIPK4Q8NE63 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC15.3■□□□□ 0.04
HIPK4Q8NE63 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HIPK4Q8NE63 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC15.3■□□□□ 0.04
HIPK4Q8NE63 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
HIPK4Q8NE63 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
HIPK4Q8NE63 ABR-205ENST00000544583 5595 ntTSL 2 BASIC15.3■□□□□ 0.04
HIPK4Q8NE63 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
HIPK4Q8NE63 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
HIPK4Q8NE63 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HIPK4Q8NE63 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HIPK4Q8NE63 RELA-227ENST00000615805 2236 ntTSL 5 BASIC15.29■□□□□ 0.04
HIPK4Q8NE63 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
HIPK4Q8NE63 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HIPK4Q8NE63 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HIPK4Q8NE63 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
HIPK4Q8NE63 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC15.29■□□□□ 0.04
HIPK4Q8NE63 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HIPK4Q8NE63 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
HIPK4Q8NE63 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC15.29■□□□□ 0.04
HIPK4Q8NE63 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC15.29■□□□□ 0.04
HIPK4Q8NE63 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
HIPK4Q8NE63 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
HIPK4Q8NE63 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
HIPK4Q8NE63 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
HIPK4Q8NE63 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
HIPK4Q8NE63 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
HIPK4Q8NE63 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HIPK4Q8NE63 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HIPK4Q8NE63 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
HIPK4Q8NE63 PMS2P4-201ENST00000412466 1052 ntBASIC15.29■□□□□ 0.04
HIPK4Q8NE63 HNRNPDP1-201ENST00000439535 754 ntBASIC15.29■□□□□ 0.04
HIPK4Q8NE63 FAM197Y8-203ENST00000450145 560 ntBASIC15.29■□□□□ 0.04
HIPK4Q8NE63 AF186996.4-201ENST00000467186 377 ntBASIC15.29■□□□□ 0.04
HIPK4Q8NE63 CXCL1P1-201ENST00000502804 216 ntBASIC15.29■□□□□ 0.04
HIPK4Q8NE63 MOK-208ENST00000519058 917 ntTSL 2 BASIC15.29■□□□□ 0.04
HIPK4Q8NE63 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC15.29■□□□□ 0.04
HIPK4Q8NE63 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
HIPK4Q8NE63 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
HIPK4Q8NE63 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC15.29■□□□□ 0.04
HIPK4Q8NE63 AC012640.2-201ENST00000561606 901 ntBASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 62.5 ms