Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC14.82□□□□□ -0.04
SIMC1Q8NDZ2 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC14.82□□□□□ -0.04
SIMC1Q8NDZ2 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
SIMC1Q8NDZ2 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SIMC1Q8NDZ2 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC14.82□□□□□ -0.04
SIMC1Q8NDZ2 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SIMC1Q8NDZ2 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
SIMC1Q8NDZ2 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC14.82□□□□□ -0.04
SIMC1Q8NDZ2 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SIMC1Q8NDZ2 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SIMC1Q8NDZ2 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SIMC1Q8NDZ2 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC14.81□□□□□ -0.04
SIMC1Q8NDZ2 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SIMC1Q8NDZ2 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SIMC1Q8NDZ2 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SIMC1Q8NDZ2 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SIMC1Q8NDZ2 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
SIMC1Q8NDZ2 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
SIMC1Q8NDZ2 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SIMC1Q8NDZ2 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
SIMC1Q8NDZ2 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SIMC1Q8NDZ2 CENPM-205ENST00000404067 905 ntTSL 3 BASIC14.81□□□□□ -0.04
SIMC1Q8NDZ2 WDR53-203ENST00000429115 683 ntTSL 2 BASIC14.81□□□□□ -0.04
SIMC1Q8NDZ2 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SIMC1Q8NDZ2 HLA-V-204ENST00000476601 1289 ntBASIC14.81□□□□□ -0.04
SIMC1Q8NDZ2 PTK7-212ENST00000476760 902 ntTSL 2 BASIC14.81□□□□□ -0.04
SIMC1Q8NDZ2 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC14.81□□□□□ -0.04
SIMC1Q8NDZ2 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
SIMC1Q8NDZ2 PRR29-209ENST00000582540 967 ntTSL 2 BASIC14.81□□□□□ -0.04
SIMC1Q8NDZ2 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC14.81□□□□□ -0.04
SIMC1Q8NDZ2 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC14.81□□□□□ -0.04
SIMC1Q8NDZ2 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC14.81□□□□□ -0.04
SIMC1Q8NDZ2 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC14.81□□□□□ -0.04
SIMC1Q8NDZ2 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
SIMC1Q8NDZ2 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SIMC1Q8NDZ2 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC14.81□□□□□ -0.04
SIMC1Q8NDZ2 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
SIMC1Q8NDZ2 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
SIMC1Q8NDZ2 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC14.81□□□□□ -0.04
SIMC1Q8NDZ2 AP002414.2-201ENST00000591780 3365 ntBASIC14.81□□□□□ -0.04
SIMC1Q8NDZ2 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SIMC1Q8NDZ2 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SIMC1Q8NDZ2 AC105250.1-201ENST00000509378 2057 ntBASIC14.81□□□□□ -0.04
SIMC1Q8NDZ2 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
SIMC1Q8NDZ2 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SIMC1Q8NDZ2 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SIMC1Q8NDZ2 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC14.81□□□□□ -0.04
SIMC1Q8NDZ2 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SIMC1Q8NDZ2 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SIMC1Q8NDZ2 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SIMC1Q8NDZ2 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
SIMC1Q8NDZ2 PPT1-215ENST00000641471 2368 ntBASIC14.81□□□□□ -0.04
SIMC1Q8NDZ2 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SIMC1Q8NDZ2 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SIMC1Q8NDZ2 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC14.8□□□□□ -0.04
SIMC1Q8NDZ2 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SIMC1Q8NDZ2 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC14.8□□□□□ -0.04
SIMC1Q8NDZ2 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SIMC1Q8NDZ2 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC14.8□□□□□ -0.04
SIMC1Q8NDZ2 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SIMC1Q8NDZ2 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
SIMC1Q8NDZ2 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SIMC1Q8NDZ2 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
SIMC1Q8NDZ2 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SIMC1Q8NDZ2 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SIMC1Q8NDZ2 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
SIMC1Q8NDZ2 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SIMC1Q8NDZ2 CALY-203ENST00000368558 825 ntTSL 5 BASIC14.8□□□□□ -0.04
SIMC1Q8NDZ2 AC074338.1-201ENST00000416825 156 ntBASIC14.8□□□□□ -0.04
SIMC1Q8NDZ2 RAD18-204ENST00000418463 563 ntTSL 4 BASIC14.8□□□□□ -0.04
SIMC1Q8NDZ2 RAD18-205ENST00000421052 582 ntTSL 3 BASIC14.8□□□□□ -0.04
SIMC1Q8NDZ2 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SIMC1Q8NDZ2 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC14.8□□□□□ -0.04
SIMC1Q8NDZ2 COX20P2-201ENST00000452636 358 ntBASIC14.8□□□□□ -0.04
SIMC1Q8NDZ2 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC14.8□□□□□ -0.04
SIMC1Q8NDZ2 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC14.8□□□□□ -0.04
SIMC1Q8NDZ2 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC14.8□□□□□ -0.04
SIMC1Q8NDZ2 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SIMC1Q8NDZ2 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC14.8□□□□□ -0.04
SIMC1Q8NDZ2 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC14.8□□□□□ -0.04
SIMC1Q8NDZ2 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC14.8□□□□□ -0.04
SIMC1Q8NDZ2 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SIMC1Q8NDZ2 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC14.8□□□□□ -0.04
SIMC1Q8NDZ2 AL033527.5-202ENST00000641632 1098 ntBASIC14.8□□□□□ -0.04
SIMC1Q8NDZ2 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SIMC1Q8NDZ2 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SIMC1Q8NDZ2 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SIMC1Q8NDZ2 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
SIMC1Q8NDZ2 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
SIMC1Q8NDZ2 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SIMC1Q8NDZ2 AC100757.3-201ENST00000622361 1406 ntBASIC14.8□□□□□ -0.04
SIMC1Q8NDZ2 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC14.8□□□□□ -0.04
SIMC1Q8NDZ2 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC14.8□□□□□ -0.04
SIMC1Q8NDZ2 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SIMC1Q8NDZ2 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC14.8□□□□□ -0.04
SIMC1Q8NDZ2 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC14.8□□□□□ -0.04
SIMC1Q8NDZ2 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SIMC1Q8NDZ2 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC14.8□□□□□ -0.04
SIMC1Q8NDZ2 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
SIMC1Q8NDZ2 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC14.8□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms