Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC14.69□□□□□ -0.06
DEPDC4Q8N2C3 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC14.69□□□□□ -0.06
DEPDC4Q8N2C3 CEND1P1-201ENST00000451006 455 ntBASIC14.69□□□□□ -0.06
DEPDC4Q8N2C3 AC112191.1-201ENST00000523689 701 ntBASIC14.69□□□□□ -0.06
DEPDC4Q8N2C3 MMP17-203ENST00000535004 719 ntTSL 3 BASIC14.69□□□□□ -0.06
DEPDC4Q8N2C3 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC14.69□□□□□ -0.06
DEPDC4Q8N2C3 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC14.69□□□□□ -0.06
DEPDC4Q8N2C3 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
DEPDC4Q8N2C3 AC068137.2-201ENST00000605408 478 ntBASIC14.69□□□□□ -0.06
DEPDC4Q8N2C3 AC055717.3-201ENST00000622967 595 ntBASIC14.69□□□□□ -0.06
DEPDC4Q8N2C3 AC134684.3-201ENST00000641758 218 ntBASIC14.69□□□□□ -0.06
DEPDC4Q8N2C3 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
DEPDC4Q8N2C3 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
DEPDC4Q8N2C3 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC14.69□□□□□ -0.06
DEPDC4Q8N2C3 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
DEPDC4Q8N2C3 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
DEPDC4Q8N2C3 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
DEPDC4Q8N2C3 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
DEPDC4Q8N2C3 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
DEPDC4Q8N2C3 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
DEPDC4Q8N2C3 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
DEPDC4Q8N2C3 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
DEPDC4Q8N2C3 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC14.69□□□□□ -0.06
DEPDC4Q8N2C3 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC14.69□□□□□ -0.06
DEPDC4Q8N2C3 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
DEPDC4Q8N2C3 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC14.69□□□□□ -0.06
DEPDC4Q8N2C3 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
DEPDC4Q8N2C3 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
DEPDC4Q8N2C3 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.06
DEPDC4Q8N2C3 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
DEPDC4Q8N2C3 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
DEPDC4Q8N2C3 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC14.68□□□□□ -0.06
DEPDC4Q8N2C3 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC14.68□□□□□ -0.06
DEPDC4Q8N2C3 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC14.68□□□□□ -0.06
DEPDC4Q8N2C3 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
DEPDC4Q8N2C3 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
DEPDC4Q8N2C3 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
DEPDC4Q8N2C3 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC14.68□□□□□ -0.06
DEPDC4Q8N2C3 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC14.68□□□□□ -0.06
DEPDC4Q8N2C3 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC14.68□□□□□ -0.06
DEPDC4Q8N2C3 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
DEPDC4Q8N2C3 RELA-227ENST00000615805 2236 ntTSL 5 BASIC14.68□□□□□ -0.06
DEPDC4Q8N2C3 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
DEPDC4Q8N2C3 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.06
DEPDC4Q8N2C3 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC14.68□□□□□ -0.06
DEPDC4Q8N2C3 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
DEPDC4Q8N2C3 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
DEPDC4Q8N2C3 CD82-202ENST00000342935 967 ntTSL 5 BASIC14.68□□□□□ -0.06
DEPDC4Q8N2C3 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC14.68□□□□□ -0.06
DEPDC4Q8N2C3 EHF-205ENST00000527935 557 ntTSL 2 BASIC14.68□□□□□ -0.06
DEPDC4Q8N2C3 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC14.68□□□□□ -0.06
DEPDC4Q8N2C3 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
DEPDC4Q8N2C3 MIR4469-201ENST00000583919 79 ntBASIC14.68□□□□□ -0.06
DEPDC4Q8N2C3 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
DEPDC4Q8N2C3 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC14.68□□□□□ -0.06
DEPDC4Q8N2C3 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
DEPDC4Q8N2C3 GRK6P1-201ENST00000400595 1711 ntBASIC14.68□□□□□ -0.06
DEPDC4Q8N2C3 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
DEPDC4Q8N2C3 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
DEPDC4Q8N2C3 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC14.68□□□□□ -0.06
DEPDC4Q8N2C3 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
DEPDC4Q8N2C3 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
DEPDC4Q8N2C3 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
DEPDC4Q8N2C3 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
DEPDC4Q8N2C3 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC14.68□□□□□ -0.06
DEPDC4Q8N2C3 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC14.68□□□□□ -0.06
DEPDC4Q8N2C3 MROH4P-201ENST00000431302 1578 ntBASIC14.68□□□□□ -0.06
DEPDC4Q8N2C3 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
DEPDC4Q8N2C3 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC14.68□□□□□ -0.06
DEPDC4Q8N2C3 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
DEPDC4Q8N2C3 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC14.68□□□□□ -0.06
DEPDC4Q8N2C3 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
DEPDC4Q8N2C3 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC14.68□□□□□ -0.06
DEPDC4Q8N2C3 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC14.68□□□□□ -0.06
DEPDC4Q8N2C3 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
DEPDC4Q8N2C3 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
DEPDC4Q8N2C3 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC14.67□□□□□ -0.06
DEPDC4Q8N2C3 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
DEPDC4Q8N2C3 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC14.67□□□□□ -0.06
DEPDC4Q8N2C3 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
DEPDC4Q8N2C3 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
DEPDC4Q8N2C3 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
DEPDC4Q8N2C3 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC14.67□□□□□ -0.06
DEPDC4Q8N2C3 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC14.67□□□□□ -0.06
DEPDC4Q8N2C3 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
DEPDC4Q8N2C3 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC14.67□□□□□ -0.06
DEPDC4Q8N2C3 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
DEPDC4Q8N2C3 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
DEPDC4Q8N2C3 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
DEPDC4Q8N2C3 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
DEPDC4Q8N2C3 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC14.67□□□□□ -0.06
DEPDC4Q8N2C3 FAM58CP-201ENST00000435741 640 ntBASIC14.67□□□□□ -0.06
DEPDC4Q8N2C3 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC14.67□□□□□ -0.06
DEPDC4Q8N2C3 CFL1-202ENST00000524553 860 ntTSL 2 BASIC14.67□□□□□ -0.06
DEPDC4Q8N2C3 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC14.67□□□□□ -0.06
DEPDC4Q8N2C3 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC14.67□□□□□ -0.06
DEPDC4Q8N2C3 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC14.67□□□□□ -0.06
DEPDC4Q8N2C3 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
DEPDC4Q8N2C3 AL031432.2-201ENST00000566714 459 ntBASIC14.67□□□□□ -0.06
DEPDC4Q8N2C3 AL928711.1-201ENST00000570165 459 ntBASIC14.67□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms