Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 AP006294.1-201ENST00000415407 339 ntBASIC14.39□□□□□ -0.11
C9orf40Q8IXQ3 PNKD-204ENST00000436005 978 ntTSL 5 BASIC14.39□□□□□ -0.11
C9orf40Q8IXQ3 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC14.39□□□□□ -0.11
C9orf40Q8IXQ3 GAPDHP40-201ENST00000505218 1006 ntBASIC14.39□□□□□ -0.11
C9orf40Q8IXQ3 HNRNPA1P13-201ENST00000510646 963 ntBASIC14.39□□□□□ -0.11
C9orf40Q8IXQ3 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC14.39□□□□□ -0.11
C9orf40Q8IXQ3 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
C9orf40Q8IXQ3 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC14.39□□□□□ -0.11
C9orf40Q8IXQ3 AC005225.4-201ENST00000557330 545 ntBASIC14.39□□□□□ -0.11
C9orf40Q8IXQ3 AL359711.2-201ENST00000563105 872 ntBASIC14.39□□□□□ -0.11
C9orf40Q8IXQ3 AC124283.3-201ENST00000570869 594 ntBASIC14.39□□□□□ -0.11
C9orf40Q8IXQ3 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC14.39□□□□□ -0.11
C9orf40Q8IXQ3 AC012645.4-201ENST00000610691 1061 ntBASIC14.39□□□□□ -0.11
C9orf40Q8IXQ3 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC14.39□□□□□ -0.11
C9orf40Q8IXQ3 GPR39-203ENST00000622084 900 ntTSL 5 BASIC14.39□□□□□ -0.11
C9orf40Q8IXQ3 AL358472.5-202ENST00000641448 1267 ntBASIC14.39□□□□□ -0.11
C9orf40Q8IXQ3 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
C9orf40Q8IXQ3 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
C9orf40Q8IXQ3 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
C9orf40Q8IXQ3 CICP6-201ENST00000457191 2729 ntBASIC14.39□□□□□ -0.11
C9orf40Q8IXQ3 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
C9orf40Q8IXQ3 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
C9orf40Q8IXQ3 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
C9orf40Q8IXQ3 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC14.39□□□□□ -0.11
C9orf40Q8IXQ3 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
C9orf40Q8IXQ3 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
C9orf40Q8IXQ3 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
C9orf40Q8IXQ3 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
C9orf40Q8IXQ3 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
C9orf40Q8IXQ3 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
C9orf40Q8IXQ3 AL596257.1-201ENST00000641463 2694 ntBASIC14.38□□□□□ -0.11
C9orf40Q8IXQ3 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC14.38□□□□□ -0.11
C9orf40Q8IXQ3 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
C9orf40Q8IXQ3 GSN-206ENST00000394353 2311 ntTSL 2 BASIC14.38□□□□□ -0.11
C9orf40Q8IXQ3 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
C9orf40Q8IXQ3 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
C9orf40Q8IXQ3 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC14.38□□□□□ -0.11
C9orf40Q8IXQ3 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
C9orf40Q8IXQ3 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC14.38□□□□□ -0.11
C9orf40Q8IXQ3 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC14.38□□□□□ -0.11
C9orf40Q8IXQ3 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
C9orf40Q8IXQ3 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
C9orf40Q8IXQ3 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
C9orf40Q8IXQ3 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
C9orf40Q8IXQ3 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
C9orf40Q8IXQ3 LCK-206ENST00000373564 2137 ntTSL 5 BASIC14.38□□□□□ -0.11
C9orf40Q8IXQ3 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
C9orf40Q8IXQ3 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC14.38□□□□□ -0.11
C9orf40Q8IXQ3 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
C9orf40Q8IXQ3 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
C9orf40Q8IXQ3 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC14.38□□□□□ -0.11
C9orf40Q8IXQ3 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
C9orf40Q8IXQ3 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
C9orf40Q8IXQ3 API5-202ENST00000420461 2009 ntTSL 2 BASIC14.38□□□□□ -0.11
C9orf40Q8IXQ3 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
C9orf40Q8IXQ3 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC14.38□□□□□ -0.11
C9orf40Q8IXQ3 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
C9orf40Q8IXQ3 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
C9orf40Q8IXQ3 AC098614.1-201ENST00000368528 745 ntBASIC14.38□□□□□ -0.11
C9orf40Q8IXQ3 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC14.38□□□□□ -0.11
C9orf40Q8IXQ3 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
C9orf40Q8IXQ3 AC134915.1-201ENST00000426461 574 ntBASIC14.38□□□□□ -0.11
C9orf40Q8IXQ3 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC14.38□□□□□ -0.11
C9orf40Q8IXQ3 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
C9orf40Q8IXQ3 PFN2-205ENST00000461868 613 ntTSL 2 BASIC14.38□□□□□ -0.11
C9orf40Q8IXQ3 AC026410.3-201ENST00000514280 936 ntBASIC14.38□□□□□ -0.11
C9orf40Q8IXQ3 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC14.38□□□□□ -0.11
C9orf40Q8IXQ3 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC14.38□□□□□ -0.11
C9orf40Q8IXQ3 AC120045.2-201ENST00000567334 178 ntBASIC14.38□□□□□ -0.11
C9orf40Q8IXQ3 AC107373.2-201ENST00000607735 490 ntBASIC14.38□□□□□ -0.11
C9orf40Q8IXQ3 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC14.38□□□□□ -0.11
C9orf40Q8IXQ3 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC14.38□□□□□ -0.11
C9orf40Q8IXQ3 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC14.38□□□□□ -0.11
C9orf40Q8IXQ3 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
C9orf40Q8IXQ3 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC14.38□□□□□ -0.11
C9orf40Q8IXQ3 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
C9orf40Q8IXQ3 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC14.38□□□□□ -0.11
C9orf40Q8IXQ3 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
C9orf40Q8IXQ3 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
C9orf40Q8IXQ3 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC14.38□□□□□ -0.11
C9orf40Q8IXQ3 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
C9orf40Q8IXQ3 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC14.38□□□□□ -0.11
C9orf40Q8IXQ3 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
C9orf40Q8IXQ3 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
C9orf40Q8IXQ3 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
C9orf40Q8IXQ3 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
C9orf40Q8IXQ3 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC14.38□□□□□ -0.11
C9orf40Q8IXQ3 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC14.38□□□□□ -0.11
C9orf40Q8IXQ3 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
C9orf40Q8IXQ3 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
C9orf40Q8IXQ3 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC14.38□□□□□ -0.11
C9orf40Q8IXQ3 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
C9orf40Q8IXQ3 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC14.38□□□□□ -0.11
C9orf40Q8IXQ3 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC14.38□□□□□ -0.11
C9orf40Q8IXQ3 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
C9orf40Q8IXQ3 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
C9orf40Q8IXQ3 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
C9orf40Q8IXQ3 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
C9orf40Q8IXQ3 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
C9orf40Q8IXQ3 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC14.37□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 57 ms