Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LINC00346Q8IVM7 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LINC00346Q8IVM7 RER1-203ENST00000378513 3000 ntTSL 3 BASIC13.91□□□□□ -0.18
LINC00346Q8IVM7 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
LINC00346Q8IVM7 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
LINC00346Q8IVM7 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
LINC00346Q8IVM7 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
LINC00346Q8IVM7 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
LINC00346Q8IVM7 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
LINC00346Q8IVM7 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC13.91□□□□□ -0.18
LINC00346Q8IVM7 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LINC00346Q8IVM7 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
LINC00346Q8IVM7 AC006058.4-201ENST00000624016 1670 ntBASIC13.91□□□□□ -0.18
LINC00346Q8IVM7 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC13.91□□□□□ -0.18
LINC00346Q8IVM7 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC13.91□□□□□ -0.18
LINC00346Q8IVM7 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
LINC00346Q8IVM7 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LINC00346Q8IVM7 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
LINC00346Q8IVM7 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC13.9□□□□□ -0.18
LINC00346Q8IVM7 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
LINC00346Q8IVM7 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC13.9□□□□□ -0.18
LINC00346Q8IVM7 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC13.9□□□□□ -0.18
LINC00346Q8IVM7 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC13.9□□□□□ -0.18
LINC00346Q8IVM7 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
LINC00346Q8IVM7 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC13.9□□□□□ -0.18
LINC00346Q8IVM7 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC13.9□□□□□ -0.18
LINC00346Q8IVM7 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC13.9□□□□□ -0.18
LINC00346Q8IVM7 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
LINC00346Q8IVM7 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LINC00346Q8IVM7 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC13.9□□□□□ -0.18
LINC00346Q8IVM7 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LINC00346Q8IVM7 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC13.9□□□□□ -0.18
LINC00346Q8IVM7 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
LINC00346Q8IVM7 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
LINC00346Q8IVM7 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC13.9□□□□□ -0.18
LINC00346Q8IVM7 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC13.9□□□□□ -0.18
LINC00346Q8IVM7 ZEB1-AS1-208ENST00000607166 2503 ntBASIC13.9□□□□□ -0.18
LINC00346Q8IVM7 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC13.9□□□□□ -0.18
LINC00346Q8IVM7 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
LINC00346Q8IVM7 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
LINC00346Q8IVM7 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
LINC00346Q8IVM7 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LINC00346Q8IVM7 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
LINC00346Q8IVM7 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC13.9□□□□□ -0.18
LINC00346Q8IVM7 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC13.9□□□□□ -0.18
LINC00346Q8IVM7 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC13.9□□□□□ -0.18
LINC00346Q8IVM7 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
LINC00346Q8IVM7 RPL30-202ENST00000396070 440 ntTSL 2 BASIC13.9□□□□□ -0.18
LINC00346Q8IVM7 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
LINC00346Q8IVM7 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC13.9□□□□□ -0.18
LINC00346Q8IVM7 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC13.9□□□□□ -0.18
LINC00346Q8IVM7 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
LINC00346Q8IVM7 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
LINC00346Q8IVM7 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC13.9□□□□□ -0.18
LINC00346Q8IVM7 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
LINC00346Q8IVM7 SUOX-214ENST00000551841 906 ntTSL 3 BASIC13.9□□□□□ -0.18
LINC00346Q8IVM7 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LINC00346Q8IVM7 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC13.9□□□□□ -0.18
LINC00346Q8IVM7 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LINC00346Q8IVM7 AL133215.2-201ENST00000609242 977 ntBASIC13.9□□□□□ -0.18
LINC00346Q8IVM7 GOLGA6L17P-202ENST00000614358 1398 ntBASIC13.9□□□□□ -0.18
LINC00346Q8IVM7 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LINC00346Q8IVM7 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
LINC00346Q8IVM7 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC13.9□□□□□ -0.18
LINC00346Q8IVM7 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC13.9□□□□□ -0.18
LINC00346Q8IVM7 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC13.9□□□□□ -0.18
LINC00346Q8IVM7 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC13.9□□□□□ -0.18
LINC00346Q8IVM7 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
LINC00346Q8IVM7 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
LINC00346Q8IVM7 MST1L-201ENST00000442552 2185 ntBASIC13.9□□□□□ -0.18
LINC00346Q8IVM7 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
LINC00346Q8IVM7 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC13.9□□□□□ -0.18
LINC00346Q8IVM7 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LINC00346Q8IVM7 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LINC00346Q8IVM7 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
LINC00346Q8IVM7 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LINC00346Q8IVM7 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LINC00346Q8IVM7 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
LINC00346Q8IVM7 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC13.9□□□□□ -0.18
LINC00346Q8IVM7 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
LINC00346Q8IVM7 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LINC00346Q8IVM7 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC13.9□□□□□ -0.18
LINC00346Q8IVM7 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
LINC00346Q8IVM7 GRN-214ENST00000589265 1632 ntTSL 5 BASIC13.9□□□□□ -0.19
LINC00346Q8IVM7 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
LINC00346Q8IVM7 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LINC00346Q8IVM7 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC13.89□□□□□ -0.19
LINC00346Q8IVM7 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LINC00346Q8IVM7 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LINC00346Q8IVM7 STK33-217ENST00000534493 1895 ntTSL 2 BASIC13.89□□□□□ -0.19
LINC00346Q8IVM7 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LINC00346Q8IVM7 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
LINC00346Q8IVM7 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LINC00346Q8IVM7 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
LINC00346Q8IVM7 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LINC00346Q8IVM7 TCAF2P1-201ENST00000291129 2421 ntBASIC13.89□□□□□ -0.19
LINC00346Q8IVM7 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
LINC00346Q8IVM7 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC13.89□□□□□ -0.19
LINC00346Q8IVM7 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
LINC00346Q8IVM7 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms