Protein–RNA interactions for Protein: Q86VP3

PACS2, Phosphofurin acidic cluster sorting protein 2, humanhuman

Predictions only

Length 889 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACS2Q86VP3 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC15.9■□□□□ 0.14
PACS2Q86VP3 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC15.9■□□□□ 0.14
PACS2Q86VP3 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
PACS2Q86VP3 AC105250.1-201ENST00000509378 2057 ntBASIC15.9■□□□□ 0.14
PACS2Q86VP3 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.14
PACS2Q86VP3 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.14
PACS2Q86VP3 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.14
PACS2Q86VP3 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
PACS2Q86VP3 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PACS2Q86VP3 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PACS2Q86VP3 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PACS2Q86VP3 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PACS2Q86VP3 AL359881.3-201ENST00000602640 1721 ntBASIC15.89■□□□□ 0.13
PACS2Q86VP3 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PACS2Q86VP3 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PACS2Q86VP3 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PACS2Q86VP3 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PACS2Q86VP3 SLC35C2-203ENST00000372227 2505 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PACS2Q86VP3 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PACS2Q86VP3 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PACS2Q86VP3 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC15.89■□□□□ 0.13
PACS2Q86VP3 SLC9A3P3-201ENST00000457608 2229 ntBASIC15.89■□□□□ 0.13
PACS2Q86VP3 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PACS2Q86VP3 ENSA-206ENST00000361631 725 ntTSL 2 BASIC15.89■□□□□ 0.13
PACS2Q86VP3 MIR648-201ENST00000385046 94 ntBASIC15.89■□□□□ 0.13
PACS2Q86VP3 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC15.89■□□□□ 0.13
PACS2Q86VP3 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC15.89■□□□□ 0.13
PACS2Q86VP3 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC15.89■□□□□ 0.13
PACS2Q86VP3 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC15.89■□□□□ 0.13
PACS2Q86VP3 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PACS2Q86VP3 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC15.89■□□□□ 0.13
PACS2Q86VP3 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC15.89■□□□□ 0.13
PACS2Q86VP3 CYB561-217ENST00000582997 877 ntTSL 5 BASIC15.89■□□□□ 0.13
PACS2Q86VP3 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC15.89■□□□□ 0.13
PACS2Q86VP3 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC15.89■□□□□ 0.13
PACS2Q86VP3 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC15.89■□□□□ 0.13
PACS2Q86VP3 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC15.89■□□□□ 0.13
PACS2Q86VP3 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
PACS2Q86VP3 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PACS2Q86VP3 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
PACS2Q86VP3 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC15.89■□□□□ 0.13
PACS2Q86VP3 STK26-202ENST00000394334 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PACS2Q86VP3 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PACS2Q86VP3 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PACS2Q86VP3 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PACS2Q86VP3 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
PACS2Q86VP3 AC012370.2-204ENST00000601940 1320 ntTSL 5 BASIC15.89■□□□□ 0.13
PACS2Q86VP3 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PACS2Q86VP3 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC15.89■□□□□ 0.13
PACS2Q86VP3 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC15.89■□□□□ 0.13
PACS2Q86VP3 ELK1-201ENST00000247161 2695 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
PACS2Q86VP3 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PACS2Q86VP3 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
PACS2Q86VP3 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PACS2Q86VP3 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
PACS2Q86VP3 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PACS2Q86VP3 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PACS2Q86VP3 OTP-201ENST00000306422 3669 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PACS2Q86VP3 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PACS2Q86VP3 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC15.88■□□□□ 0.13
PACS2Q86VP3 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
PACS2Q86VP3 CYB561-202ENST00000392975 3007 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PACS2Q86VP3 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
PACS2Q86VP3 SCARB2-227ENST00000640957 3255 ntAPPRIS ALT1 TSL 5 BASIC15.88■□□□□ 0.13
PACS2Q86VP3 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
PACS2Q86VP3 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
PACS2Q86VP3 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
PACS2Q86VP3 ZCCHC6-203ENST00000375948 958 ntTSL 2 BASIC15.88■□□□□ 0.13
PACS2Q86VP3 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
PACS2Q86VP3 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC15.88■□□□□ 0.13
PACS2Q86VP3 AL590627.1-203ENST00000421194 1026 ntBASIC15.88■□□□□ 0.13
PACS2Q86VP3 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC15.88■□□□□ 0.13
PACS2Q86VP3 EIF2S2P5-201ENST00000457635 968 ntBASIC15.88■□□□□ 0.13
PACS2Q86VP3 AC022494.1-201ENST00000466044 728 ntBASIC15.88■□□□□ 0.13
PACS2Q86VP3 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC15.88■□□□□ 0.13
PACS2Q86VP3 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC15.88■□□□□ 0.13
PACS2Q86VP3 AC105339.3-201ENST00000560043 636 ntBASIC15.88■□□□□ 0.13
PACS2Q86VP3 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC15.88■□□□□ 0.13
PACS2Q86VP3 SDCCAG3P1-201ENST00000589292 1150 ntBASIC15.88■□□□□ 0.13
PACS2Q86VP3 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC15.88■□□□□ 0.13
PACS2Q86VP3 MIR1199-201ENST00000621445 119 ntBASIC15.88■□□□□ 0.13
PACS2Q86VP3 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC15.88■□□□□ 0.13
PACS2Q86VP3 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
PACS2Q86VP3 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PACS2Q86VP3 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PACS2Q86VP3 AC097359.2-201ENST00000604992 2389 ntBASIC15.88■□□□□ 0.13
PACS2Q86VP3 ST20-AS1-201ENST00000560255 4223 ntBASIC15.88■□□□□ 0.13
PACS2Q86VP3 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PACS2Q86VP3 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC15.88■□□□□ 0.13
PACS2Q86VP3 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PACS2Q86VP3 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PACS2Q86VP3 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PACS2Q86VP3 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC15.88■□□□□ 0.13
PACS2Q86VP3 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC15.88■□□□□ 0.13
PACS2Q86VP3 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
PACS2Q86VP3 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PACS2Q86VP3 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC15.88■□□□□ 0.13
PACS2Q86VP3 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
PACS2Q86VP3 SF1-202ENST00000334944 3094 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
PACS2Q86VP3 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC15.88■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms