Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 AC092580.3-201ENST00000430932 139 ntBASIC14.11□□□□□ -0.15
NHLRC1Q6VVB1 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NHLRC1Q6VVB1 CNN2P2-201ENST00000443536 909 ntBASIC14.11□□□□□ -0.15
NHLRC1Q6VVB1 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
NHLRC1Q6VVB1 CNN2P3-201ENST00000450201 906 ntBASIC14.11□□□□□ -0.15
NHLRC1Q6VVB1 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC14.11□□□□□ -0.15
NHLRC1Q6VVB1 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC14.11□□□□□ -0.15
NHLRC1Q6VVB1 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC14.11□□□□□ -0.15
NHLRC1Q6VVB1 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC14.11□□□□□ -0.15
NHLRC1Q6VVB1 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
NHLRC1Q6VVB1 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC14.11□□□□□ -0.15
NHLRC1Q6VVB1 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC14.11□□□□□ -0.15
NHLRC1Q6VVB1 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC14.11□□□□□ -0.15
NHLRC1Q6VVB1 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC14.11□□□□□ -0.15
NHLRC1Q6VVB1 AC004449.1-201ENST00000564240 433 ntBASIC14.11□□□□□ -0.15
NHLRC1Q6VVB1 AC140878.1-201ENST00000565277 250 ntBASIC14.11□□□□□ -0.15
NHLRC1Q6VVB1 LSM12-202ENST00000585388 942 ntTSL 3 BASIC14.11□□□□□ -0.15
NHLRC1Q6VVB1 TEX28P1-201ENST00000613479 1221 ntBASIC14.11□□□□□ -0.15
NHLRC1Q6VVB1 TEX28P2-201ENST00000617764 1221 ntBASIC14.11□□□□□ -0.15
NHLRC1Q6VVB1 AL136317.3-201ENST00000618497 906 ntBASIC14.11□□□□□ -0.15
NHLRC1Q6VVB1 ING5-213ENST00000636051 4199 ntTSL 5 BASIC14.11□□□□□ -0.15
NHLRC1Q6VVB1 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
NHLRC1Q6VVB1 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC14.11□□□□□ -0.15
NHLRC1Q6VVB1 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
NHLRC1Q6VVB1 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
NHLRC1Q6VVB1 Z97205.2-201ENST00000564697 1639 ntBASIC14.11□□□□□ -0.15
NHLRC1Q6VVB1 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
NHLRC1Q6VVB1 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NHLRC1Q6VVB1 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NHLRC1Q6VVB1 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC14.11□□□□□ -0.15
NHLRC1Q6VVB1 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC14.11□□□□□ -0.15
NHLRC1Q6VVB1 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NHLRC1Q6VVB1 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
NHLRC1Q6VVB1 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
NHLRC1Q6VVB1 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC14.11□□□□□ -0.15
NHLRC1Q6VVB1 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
NHLRC1Q6VVB1 AC136621.1-201ENST00000624017 2304 ntBASIC14.1□□□□□ -0.15
NHLRC1Q6VVB1 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC14.1□□□□□ -0.15
NHLRC1Q6VVB1 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
NHLRC1Q6VVB1 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
NHLRC1Q6VVB1 FO538757.1-201ENST00000623083 1397 ntBASIC14.1□□□□□ -0.15
NHLRC1Q6VVB1 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
NHLRC1Q6VVB1 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
NHLRC1Q6VVB1 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
NHLRC1Q6VVB1 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
NHLRC1Q6VVB1 AC026748.1-201ENST00000624349 3251 ntBASIC14.1□□□□□ -0.15
NHLRC1Q6VVB1 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC14.1□□□□□ -0.15
NHLRC1Q6VVB1 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC14.1□□□□□ -0.15
NHLRC1Q6VVB1 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
NHLRC1Q6VVB1 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
NHLRC1Q6VVB1 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
NHLRC1Q6VVB1 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
NHLRC1Q6VVB1 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
NHLRC1Q6VVB1 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
NHLRC1Q6VVB1 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC14.1□□□□□ -0.15
NHLRC1Q6VVB1 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC14.1□□□□□ -0.15
NHLRC1Q6VVB1 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC14.1□□□□□ -0.15
NHLRC1Q6VVB1 KLF2P3-201ENST00000451977 1087 ntBASIC14.1□□□□□ -0.15
NHLRC1Q6VVB1 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
NHLRC1Q6VVB1 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC14.1□□□□□ -0.15
NHLRC1Q6VVB1 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC14.1□□□□□ -0.15
NHLRC1Q6VVB1 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC14.1□□□□□ -0.15
NHLRC1Q6VVB1 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC14.1□□□□□ -0.15
NHLRC1Q6VVB1 AC025048.3-201ENST00000590609 569 ntBASIC14.1□□□□□ -0.15
NHLRC1Q6VVB1 AC005702.4-201ENST00000618393 416 ntBASIC14.1□□□□□ -0.15
NHLRC1Q6VVB1 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC14.1□□□□□ -0.15
NHLRC1Q6VVB1 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC14.1□□□□□ -0.15
NHLRC1Q6VVB1 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
NHLRC1Q6VVB1 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
NHLRC1Q6VVB1 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC14.1□□□□□ -0.15
NHLRC1Q6VVB1 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
NHLRC1Q6VVB1 AC127383.1-201ENST00000444697 1800 ntBASIC14.1□□□□□ -0.15
NHLRC1Q6VVB1 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
NHLRC1Q6VVB1 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
NHLRC1Q6VVB1 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
NHLRC1Q6VVB1 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
NHLRC1Q6VVB1 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
NHLRC1Q6VVB1 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
NHLRC1Q6VVB1 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
NHLRC1Q6VVB1 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
NHLRC1Q6VVB1 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
NHLRC1Q6VVB1 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC14.1□□□□□ -0.15
NHLRC1Q6VVB1 TMBIM7P-203ENST00000641617 1718 ntBASIC14.1□□□□□ -0.15
NHLRC1Q6VVB1 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
NHLRC1Q6VVB1 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
NHLRC1Q6VVB1 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
NHLRC1Q6VVB1 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
NHLRC1Q6VVB1 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
NHLRC1Q6VVB1 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
NHLRC1Q6VVB1 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
NHLRC1Q6VVB1 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
NHLRC1Q6VVB1 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC14.09□□□□□ -0.15
NHLRC1Q6VVB1 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
NHLRC1Q6VVB1 AP003680.1-201ENST00000598970 3660 ntBASIC14.09□□□□□ -0.15
NHLRC1Q6VVB1 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
NHLRC1Q6VVB1 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
NHLRC1Q6VVB1 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
NHLRC1Q6VVB1 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
NHLRC1Q6VVB1 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC14.09□□□□□ -0.15
NHLRC1Q6VVB1 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms