Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
C11orf88Q6PI97 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
C11orf88Q6PI97 ZMIZ2-206ENST00000441627 5089 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
C11orf88Q6PI97 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
C11orf88Q6PI97 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
C11orf88Q6PI97 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
C11orf88Q6PI97 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
C11orf88Q6PI97 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC13.78□□□□□ -0.2
C11orf88Q6PI97 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC13.78□□□□□ -0.2
C11orf88Q6PI97 UPF3AP3-201ENST00000420996 769 ntBASIC13.78□□□□□ -0.2
C11orf88Q6PI97 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
C11orf88Q6PI97 AC009947.1-201ENST00000444350 727 ntBASIC13.78□□□□□ -0.2
C11orf88Q6PI97 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC13.78□□□□□ -0.2
C11orf88Q6PI97 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC13.78□□□□□ -0.2
C11orf88Q6PI97 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC13.78□□□□□ -0.2
C11orf88Q6PI97 MTDHP5-201ENST00000598980 586 ntBASIC13.78□□□□□ -0.2
C11orf88Q6PI97 AC004706.3-202ENST00000621574 984 ntBASIC13.78□□□□□ -0.2
C11orf88Q6PI97 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
C11orf88Q6PI97 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC13.78□□□□□ -0.2
C11orf88Q6PI97 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
C11orf88Q6PI97 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
C11orf88Q6PI97 AP002414.3-201ENST00000589352 1468 ntBASIC13.78□□□□□ -0.2
C11orf88Q6PI97 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
C11orf88Q6PI97 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC13.78□□□□□ -0.2
C11orf88Q6PI97 SGTB-201ENST00000381007 5469 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
C11orf88Q6PI97 GNL1-201ENST00000376621 7490 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
C11orf88Q6PI97 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
C11orf88Q6PI97 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
C11orf88Q6PI97 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
C11orf88Q6PI97 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC13.78□□□□□ -0.2
C11orf88Q6PI97 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
C11orf88Q6PI97 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC13.78□□□□□ -0.2
C11orf88Q6PI97 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
C11orf88Q6PI97 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
C11orf88Q6PI97 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
C11orf88Q6PI97 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
C11orf88Q6PI97 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC13.78□□□□□ -0.2
C11orf88Q6PI97 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
C11orf88Q6PI97 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC13.78□□□□□ -0.2
C11orf88Q6PI97 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.2
C11orf88Q6PI97 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC13.77□□□□□ -0.2
C11orf88Q6PI97 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
C11orf88Q6PI97 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
C11orf88Q6PI97 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
C11orf88Q6PI97 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
C11orf88Q6PI97 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
C11orf88Q6PI97 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
C11orf88Q6PI97 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
C11orf88Q6PI97 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
C11orf88Q6PI97 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
C11orf88Q6PI97 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
C11orf88Q6PI97 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
C11orf88Q6PI97 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC13.77□□□□□ -0.21
C11orf88Q6PI97 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC13.77□□□□□ -0.21
C11orf88Q6PI97 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC13.77□□□□□ -0.21
C11orf88Q6PI97 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
C11orf88Q6PI97 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC13.77□□□□□ -0.21
C11orf88Q6PI97 WDR53-204ENST00000433160 887 ntTSL 5 BASIC13.77□□□□□ -0.21
C11orf88Q6PI97 AC108751.1-201ENST00000490852 363 ntBASIC13.77□□□□□ -0.21
C11orf88Q6PI97 NMU-202ENST00000505262 693 ntTSL 3 BASIC13.77□□□□□ -0.21
C11orf88Q6PI97 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC13.77□□□□□ -0.21
C11orf88Q6PI97 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
C11orf88Q6PI97 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC13.77□□□□□ -0.21
C11orf88Q6PI97 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC13.77□□□□□ -0.21
C11orf88Q6PI97 CD63-210ENST00000550776 870 ntTSL 5 BASIC13.77□□□□□ -0.21
C11orf88Q6PI97 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC13.77□□□□□ -0.21
C11orf88Q6PI97 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
C11orf88Q6PI97 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
C11orf88Q6PI97 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC13.77□□□□□ -0.21
C11orf88Q6PI97 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC13.77□□□□□ -0.21
C11orf88Q6PI97 CICP23-201ENST00000605013 2741 ntBASIC13.77□□□□□ -0.21
C11orf88Q6PI97 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC13.77□□□□□ -0.21
C11orf88Q6PI97 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
C11orf88Q6PI97 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
C11orf88Q6PI97 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
C11orf88Q6PI97 TRAK1-201ENST00000327628 5293 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
C11orf88Q6PI97 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
C11orf88Q6PI97 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC13.76□□□□□ -0.21
C11orf88Q6PI97 GLIS3-201ENST00000324333 6667 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
C11orf88Q6PI97 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
C11orf88Q6PI97 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC13.76□□□□□ -0.21
C11orf88Q6PI97 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
C11orf88Q6PI97 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
C11orf88Q6PI97 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
C11orf88Q6PI97 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
C11orf88Q6PI97 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
C11orf88Q6PI97 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
C11orf88Q6PI97 API5-202ENST00000420461 2009 ntTSL 2 BASIC13.76□□□□□ -0.21
C11orf88Q6PI97 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
C11orf88Q6PI97 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
C11orf88Q6PI97 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
C11orf88Q6PI97 MAD2L1-201ENST00000296509 5468 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
C11orf88Q6PI97 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
C11orf88Q6PI97 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC13.76□□□□□ -0.21
C11orf88Q6PI97 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC13.76□□□□□ -0.21
C11orf88Q6PI97 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
C11orf88Q6PI97 SESN3-203ENST00000536441 9558 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
C11orf88Q6PI97 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC13.76□□□□□ -0.21
C11orf88Q6PI97 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
C11orf88Q6PI97 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC13.76□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms