Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 RNA5-8SN4-201ENST00000613359 153 ntBASIC16.46■□□□□ 0.23
RNF43Q68DV7 RNA5-8SN5-201ENST00000619471 153 ntBASIC16.46■□□□□ 0.23
RNF43Q68DV7 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
RNF43Q68DV7 AP001282.1-201ENST00000531301 1499 ntBASIC16.46■□□□□ 0.23
RNF43Q68DV7 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
RNF43Q68DV7 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RNF43Q68DV7 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RNF43Q68DV7 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC16.46■□□□□ 0.23
RNF43Q68DV7 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
RNF43Q68DV7 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
RNF43Q68DV7 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.22
RNF43Q68DV7 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC16.46■□□□□ 0.22
RNF43Q68DV7 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
RNF43Q68DV7 SSR4P1-203ENST00000599569 2260 ntBASIC16.45■□□□□ 0.22
RNF43Q68DV7 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RNF43Q68DV7 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC16.45■□□□□ 0.22
RNF43Q68DV7 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
RNF43Q68DV7 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RNF43Q68DV7 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RNF43Q68DV7 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RNF43Q68DV7 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RNF43Q68DV7 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RNF43Q68DV7 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RNF43Q68DV7 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RNF43Q68DV7 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
RNF43Q68DV7 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
RNF43Q68DV7 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RNF43Q68DV7 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC16.45■□□□□ 0.22
RNF43Q68DV7 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC16.45■□□□□ 0.22
RNF43Q68DV7 PGF-202ENST00000405431 666 ntTSL 5 BASIC16.45■□□□□ 0.22
RNF43Q68DV7 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC16.45■□□□□ 0.22
RNF43Q68DV7 AP006294.1-201ENST00000415407 339 ntBASIC16.45■□□□□ 0.22
RNF43Q68DV7 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC16.45■□□□□ 0.22
RNF43Q68DV7 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC16.45■□□□□ 0.22
RNF43Q68DV7 ACA64.2-201ENST00000459014 129 ntBASIC16.45■□□□□ 0.22
RNF43Q68DV7 FXR1-221ENST00000491674 365 ntTSL 2 BASIC16.45■□□□□ 0.22
RNF43Q68DV7 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RNF43Q68DV7 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC16.45■□□□□ 0.22
RNF43Q68DV7 API5-211ENST00000534695 560 ntTSL 5 BASIC16.45■□□□□ 0.22
RNF43Q68DV7 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RNF43Q68DV7 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
RNF43Q68DV7 AC092337.1-201ENST00000568699 1129 ntBASIC16.45■□□□□ 0.22
RNF43Q68DV7 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC16.45■□□□□ 0.22
RNF43Q68DV7 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC16.45■□□□□ 0.22
RNF43Q68DV7 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RNF43Q68DV7 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC16.45■□□□□ 0.22
RNF43Q68DV7 5S_rRNA.22-201ENST00000614916 106 ntBASIC16.45■□□□□ 0.22
RNF43Q68DV7 AL162274.1-201ENST00000617191 1098 ntBASIC16.45■□□□□ 0.22
RNF43Q68DV7 IGHV3-72-202ENST00000621503 303 ntBASIC16.45■□□□□ 0.22
RNF43Q68DV7 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC16.45■□□□□ 0.22
RNF43Q68DV7 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RNF43Q68DV7 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
RNF43Q68DV7 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC16.45■□□□□ 0.22
RNF43Q68DV7 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RNF43Q68DV7 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC16.45■□□□□ 0.22
RNF43Q68DV7 AC138035.3-201ENST00000622706 2791 ntBASIC16.45■□□□□ 0.22
RNF43Q68DV7 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC16.45■□□□□ 0.22
RNF43Q68DV7 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
RNF43Q68DV7 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
RNF43Q68DV7 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RNF43Q68DV7 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC16.45■□□□□ 0.22
RNF43Q68DV7 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RNF43Q68DV7 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
RNF43Q68DV7 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC16.45■□□□□ 0.22
RNF43Q68DV7 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
RNF43Q68DV7 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
RNF43Q68DV7 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
RNF43Q68DV7 AC069224.1-201ENST00000566372 1715 ntBASIC16.45■□□□□ 0.22
RNF43Q68DV7 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
RNF43Q68DV7 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RNF43Q68DV7 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC16.44■□□□□ 0.22
RNF43Q68DV7 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RNF43Q68DV7 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
RNF43Q68DV7 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RNF43Q68DV7 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RNF43Q68DV7 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RNF43Q68DV7 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RNF43Q68DV7 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RNF43Q68DV7 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RNF43Q68DV7 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RNF43Q68DV7 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RNF43Q68DV7 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RNF43Q68DV7 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RNF43Q68DV7 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
RNF43Q68DV7 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RNF43Q68DV7 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC16.44■□□□□ 0.22
RNF43Q68DV7 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RNF43Q68DV7 RN7SL752P-201ENST00000463779 287 ntBASIC16.44■□□□□ 0.22
RNF43Q68DV7 SPDYE18-201ENST00000510091 1050 ntBASIC16.44■□□□□ 0.22
RNF43Q68DV7 RAB35-202ENST00000534951 939 ntTSL 2 BASIC16.44■□□□□ 0.22
RNF43Q68DV7 AC135586.1-201ENST00000539323 574 ntBASIC16.44■□□□□ 0.22
RNF43Q68DV7 Six3os1_5.1-201ENST00000611000 271 ntBASIC16.44■□□□□ 0.22
RNF43Q68DV7 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC16.44■□□□□ 0.22
RNF43Q68DV7 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC16.44■□□□□ 0.22
RNF43Q68DV7 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
RNF43Q68DV7 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
RNF43Q68DV7 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
RNF43Q68DV7 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
RNF43Q68DV7 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
RNF43Q68DV7 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms