Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
CDC42BPAQ5VT25 VCPKMT-201ENST00000395859 795 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
CDC42BPAQ5VT25 LINC00642-202ENST00000442515 670 ntTSL 3 BASIC23.06■■□□□ 1.28
CDC42BPAQ5VT25 SZRD1-203ENST00000471507 892 ntAPPRIS ALT1 TSL 2 BASIC23.06■■□□□ 1.28
CDC42BPAQ5VT25 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC23.06■■□□□ 1.28
CDC42BPAQ5VT25 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
CDC42BPAQ5VT25 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC23.06■■□□□ 1.28
CDC42BPAQ5VT25 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
CDC42BPAQ5VT25 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC23.06■■□□□ 1.28
CDC42BPAQ5VT25 AL136301.1-201ENST00000615830 422 ntBASIC23.06■■□□□ 1.28
CDC42BPAQ5VT25 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
CDC42BPAQ5VT25 AR-207ENST00000612010 3896 ntTSL 5 BASIC23.06■■□□□ 1.28
CDC42BPAQ5VT25 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC23.06■■□□□ 1.28
CDC42BPAQ5VT25 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
CDC42BPAQ5VT25 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC23.06■■□□□ 1.28
CDC42BPAQ5VT25 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
CDC42BPAQ5VT25 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC23.06■■□□□ 1.28
CDC42BPAQ5VT25 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC23.06■■□□□ 1.28
CDC42BPAQ5VT25 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
CDC42BPAQ5VT25 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC23.05■■□□□ 1.28
CDC42BPAQ5VT25 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
CDC42BPAQ5VT25 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC23.05■■□□□ 1.28
CDC42BPAQ5VT25 MEG3_2.1-201ENST00000611456 105 ntBASIC23.05■■□□□ 1.28
CDC42BPAQ5VT25 AP003419.4-201ENST00000616071 517 ntBASIC23.05■■□□□ 1.28
CDC42BPAQ5VT25 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
CDC42BPAQ5VT25 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC23.05■■□□□ 1.28
CDC42BPAQ5VT25 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC23.05■■□□□ 1.28
CDC42BPAQ5VT25 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC23.05■■□□□ 1.28
CDC42BPAQ5VT25 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC23.05■■□□□ 1.28
CDC42BPAQ5VT25 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC23.05■■□□□ 1.28
CDC42BPAQ5VT25 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC23.05■■□□□ 1.28
CDC42BPAQ5VT25 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC23.05■■□□□ 1.28
CDC42BPAQ5VT25 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC23.05■■□□□ 1.28
CDC42BPAQ5VT25 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC23.05■■□□□ 1.28
CDC42BPAQ5VT25 IGF1-201ENST00000307046 1097 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
CDC42BPAQ5VT25 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
CDC42BPAQ5VT25 IGF1-203ENST00000392904 761 ntTSL 5 BASIC23.05■■□□□ 1.28
CDC42BPAQ5VT25 FAM3B-203ENST00000398647 864 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
CDC42BPAQ5VT25 FAM3B-204ENST00000398652 1125 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
CDC42BPAQ5VT25 AC069218.1-201ENST00000435269 762 ntBASIC23.05■■□□□ 1.28
CDC42BPAQ5VT25 AC011742.3-201ENST00000439053 820 ntBASIC23.05■■□□□ 1.28
CDC42BPAQ5VT25 AC026434.2-201ENST00000506094 1078 ntBASIC23.05■■□□□ 1.28
CDC42BPAQ5VT25 HNRNPA1P36-201ENST00000521313 955 ntBASIC23.05■■□□□ 1.28
CDC42BPAQ5VT25 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC23.05■■□□□ 1.28
CDC42BPAQ5VT25 LGALS9C-215ENST00000584941 1104 ntTSL 5 BASIC23.05■■□□□ 1.28
CDC42BPAQ5VT25 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC23.05■■□□□ 1.28
CDC42BPAQ5VT25 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
CDC42BPAQ5VT25 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
CDC42BPAQ5VT25 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC23.05■■□□□ 1.28
CDC42BPAQ5VT25 ZBTB45P1-201ENST00000452761 1456 ntBASIC23.05■■□□□ 1.28
CDC42BPAQ5VT25 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC23.04■■□□□ 1.28
CDC42BPAQ5VT25 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CDC42BPAQ5VT25 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CDC42BPAQ5VT25 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC23.04■■□□□ 1.28
CDC42BPAQ5VT25 AC244394.1-201ENST00000435000 1665 ntBASIC23.04■■□□□ 1.28
CDC42BPAQ5VT25 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC23.04■■□□□ 1.28
CDC42BPAQ5VT25 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CDC42BPAQ5VT25 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC23.04■■□□□ 1.28
CDC42BPAQ5VT25 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
CDC42BPAQ5VT25 SERF2-209ENST00000409646 559 ntTSL 4 BASIC23.04■■□□□ 1.28
CDC42BPAQ5VT25 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC23.04■■□□□ 1.28
CDC42BPAQ5VT25 AC083949.1-201ENST00000422013 657 ntTSL 3 BASIC23.04■■□□□ 1.28
CDC42BPAQ5VT25 ISCA2P1-201ENST00000425548 448 ntBASIC23.04■■□□□ 1.28
CDC42BPAQ5VT25 GDAP1-202ENST00000434412 1228 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
CDC42BPAQ5VT25 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC23.04■■□□□ 1.28
CDC42BPAQ5VT25 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC23.04■■□□□ 1.28
CDC42BPAQ5VT25 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CDC42BPAQ5VT25 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC23.04■■□□□ 1.28
CDC42BPAQ5VT25 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC23.04■■□□□ 1.28
CDC42BPAQ5VT25 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC23.04■■□□□ 1.28
CDC42BPAQ5VT25 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC23.04■■□□□ 1.28
CDC42BPAQ5VT25 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC23.04■■□□□ 1.28
CDC42BPAQ5VT25 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CDC42BPAQ5VT25 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CDC42BPAQ5VT25 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC23.04■■□□□ 1.28
CDC42BPAQ5VT25 WT1-209ENST00000530998 2421 ntTSL 2 BASIC23.04■■□□□ 1.28
CDC42BPAQ5VT25 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC23.04■■□□□ 1.28
CDC42BPAQ5VT25 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC23.04■■□□□ 1.28
CDC42BPAQ5VT25 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
CDC42BPAQ5VT25 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
CDC42BPAQ5VT25 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
CDC42BPAQ5VT25 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC23.03■■□□□ 1.28
CDC42BPAQ5VT25 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC23.03■■□□□ 1.28
CDC42BPAQ5VT25 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC23.03■■□□□ 1.28
CDC42BPAQ5VT25 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC23.03■■□□□ 1.28
CDC42BPAQ5VT25 MAGEA5-201ENST00000446757 942 ntBASIC23.03■■□□□ 1.28
CDC42BPAQ5VT25 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC23.03■■□□□ 1.28
CDC42BPAQ5VT25 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC23.03■■□□□ 1.28
CDC42BPAQ5VT25 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
CDC42BPAQ5VT25 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC23.03■■□□□ 1.28
CDC42BPAQ5VT25 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC23.03■■□□□ 1.28
CDC42BPAQ5VT25 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
CDC42BPAQ5VT25 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
CDC42BPAQ5VT25 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC23.03■■□□□ 1.28
CDC42BPAQ5VT25 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
CDC42BPAQ5VT25 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC23.03■■□□□ 1.28
CDC42BPAQ5VT25 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
CDC42BPAQ5VT25 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
CDC42BPAQ5VT25 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC23.02■■□□□ 1.28
CDC42BPAQ5VT25 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms