Protein–RNA interactions for Protein: Q494W8

CHRFAM7A, CHRNA7-FAM7A fusion protein, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7AQ494W8 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CHRFAM7AQ494W8 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
CHRFAM7AQ494W8 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
CHRFAM7AQ494W8 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CHRFAM7AQ494W8 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
CHRFAM7AQ494W8 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
CHRFAM7AQ494W8 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
CHRFAM7AQ494W8 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CHRFAM7AQ494W8 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
CHRFAM7AQ494W8 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC13.81□□□□□ -0.2
CHRFAM7AQ494W8 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC13.81□□□□□ -0.2
CHRFAM7AQ494W8 COX5BP8-201ENST00000416911 349 ntBASIC13.81□□□□□ -0.2
CHRFAM7AQ494W8 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC13.81□□□□□ -0.2
CHRFAM7AQ494W8 PPP6R2P1-201ENST00000450880 1275 ntBASIC13.81□□□□□ -0.2
CHRFAM7AQ494W8 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CHRFAM7AQ494W8 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC13.81□□□□□ -0.2
CHRFAM7AQ494W8 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC13.81□□□□□ -0.2
CHRFAM7AQ494W8 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC13.81□□□□□ -0.2
CHRFAM7AQ494W8 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC13.81□□□□□ -0.2
CHRFAM7AQ494W8 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CHRFAM7AQ494W8 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
CHRFAM7AQ494W8 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CHRFAM7AQ494W8 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CHRFAM7AQ494W8 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC13.81□□□□□ -0.2
CHRFAM7AQ494W8 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CHRFAM7AQ494W8 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CHRFAM7AQ494W8 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC13.81□□□□□ -0.2
CHRFAM7AQ494W8 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CHRFAM7AQ494W8 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CHRFAM7AQ494W8 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC13.81□□□□□ -0.2
CHRFAM7AQ494W8 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CHRFAM7AQ494W8 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CHRFAM7AQ494W8 AC005622.1-201ENST00000636801 1703 ntBASIC13.81□□□□□ -0.2
CHRFAM7AQ494W8 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC13.81□□□□□ -0.2
CHRFAM7AQ494W8 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CHRFAM7AQ494W8 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CHRFAM7AQ494W8 LCK-206ENST00000373564 2137 ntTSL 5 BASIC13.81□□□□□ -0.2
CHRFAM7AQ494W8 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC13.81□□□□□ -0.2
CHRFAM7AQ494W8 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
CHRFAM7AQ494W8 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
CHRFAM7AQ494W8 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC13.81□□□□□ -0.2
CHRFAM7AQ494W8 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
CHRFAM7AQ494W8 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC13.8□□□□□ -0.2
CHRFAM7AQ494W8 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC13.8□□□□□ -0.2
CHRFAM7AQ494W8 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CHRFAM7AQ494W8 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CHRFAM7AQ494W8 AL592424.1-201ENST00000563624 1536 ntBASIC13.8□□□□□ -0.2
CHRFAM7AQ494W8 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CHRFAM7AQ494W8 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC13.8□□□□□ -0.2
CHRFAM7AQ494W8 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CHRFAM7AQ494W8 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CHRFAM7AQ494W8 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CHRFAM7AQ494W8 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CHRFAM7AQ494W8 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC13.8□□□□□ -0.2
CHRFAM7AQ494W8 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CHRFAM7AQ494W8 AC016027.1-202ENST00000607927 1699 ntBASIC13.8□□□□□ -0.2
CHRFAM7AQ494W8 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CHRFAM7AQ494W8 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
CHRFAM7AQ494W8 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
CHRFAM7AQ494W8 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CHRFAM7AQ494W8 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CHRFAM7AQ494W8 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC13.8□□□□□ -0.2
CHRFAM7AQ494W8 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CHRFAM7AQ494W8 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC13.8□□□□□ -0.2
CHRFAM7AQ494W8 HCG4-201ENST00000418983 998 ntBASIC13.8□□□□□ -0.2
CHRFAM7AQ494W8 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC13.8□□□□□ -0.2
CHRFAM7AQ494W8 GPR53P-205ENST00000457298 1084 ntBASIC13.8□□□□□ -0.2
CHRFAM7AQ494W8 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC13.8□□□□□ -0.2
CHRFAM7AQ494W8 GATD1-206ENST00000526325 756 ntTSL 5 BASIC13.8□□□□□ -0.2
CHRFAM7AQ494W8 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
CHRFAM7AQ494W8 ALG1L8P-201ENST00000533887 760 ntBASIC13.8□□□□□ -0.2
CHRFAM7AQ494W8 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
CHRFAM7AQ494W8 COQ9-214ENST00000567933 882 ntTSL 3 BASIC13.8□□□□□ -0.2
CHRFAM7AQ494W8 AC005412.3-201ENST00000580309 715 ntBASIC13.8□□□□□ -0.2
CHRFAM7AQ494W8 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC13.8□□□□□ -0.2
CHRFAM7AQ494W8 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC13.8□□□□□ -0.2
CHRFAM7AQ494W8 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
CHRFAM7AQ494W8 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
CHRFAM7AQ494W8 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CHRFAM7AQ494W8 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC13.8□□□□□ -0.2
CHRFAM7AQ494W8 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
CHRFAM7AQ494W8 BID-213ENST00000615414 2236 ntTSL 5 BASIC13.8□□□□□ -0.2
CHRFAM7AQ494W8 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CHRFAM7AQ494W8 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CHRFAM7AQ494W8 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CHRFAM7AQ494W8 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC13.8□□□□□ -0.2
CHRFAM7AQ494W8 TDG-209ENST00000544861 1387 ntTSL 2 BASIC13.8□□□□□ -0.2
CHRFAM7AQ494W8 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
CHRFAM7AQ494W8 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC13.8□□□□□ -0.2
CHRFAM7AQ494W8 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC13.8□□□□□ -0.2
CHRFAM7AQ494W8 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CHRFAM7AQ494W8 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CHRFAM7AQ494W8 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CHRFAM7AQ494W8 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CHRFAM7AQ494W8 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CHRFAM7AQ494W8 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC13.8□□□□□ -0.2
CHRFAM7AQ494W8 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CHRFAM7AQ494W8 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
CHRFAM7AQ494W8 AC023157.3-201ENST00000619086 2088 ntBASIC13.79□□□□□ -0.2
CHRFAM7AQ494W8 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms