Protein–RNA interactions for Protein: Q2M2E3

ODF4, Outer dense fiber protein 4, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ODF4Q2M2E3 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
ODF4Q2M2E3 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
ODF4Q2M2E3 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
ODF4Q2M2E3 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
ODF4Q2M2E3 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
ODF4Q2M2E3 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
ODF4Q2M2E3 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
ODF4Q2M2E3 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
ODF4Q2M2E3 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
ODF4Q2M2E3 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
ODF4Q2M2E3 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
ODF4Q2M2E3 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
ODF4Q2M2E3 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
ODF4Q2M2E3 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
ODF4Q2M2E3 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
ODF4Q2M2E3 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
ODF4Q2M2E3 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
ODF4Q2M2E3 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC13.94□□□□□ -0.18
ODF4Q2M2E3 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
ODF4Q2M2E3 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC13.94□□□□□ -0.18
ODF4Q2M2E3 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
ODF4Q2M2E3 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC13.94□□□□□ -0.18
ODF4Q2M2E3 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC13.94□□□□□ -0.18
ODF4Q2M2E3 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC13.94□□□□□ -0.18
ODF4Q2M2E3 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC13.94□□□□□ -0.18
ODF4Q2M2E3 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC13.94□□□□□ -0.18
ODF4Q2M2E3 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC13.94□□□□□ -0.18
ODF4Q2M2E3 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC13.94□□□□□ -0.18
ODF4Q2M2E3 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC13.94□□□□□ -0.18
ODF4Q2M2E3 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
ODF4Q2M2E3 RPL18-209ENST00000550645 463 ntTSL 5 BASIC13.94□□□□□ -0.18
ODF4Q2M2E3 RPL18-214ENST00000552588 559 ntTSL 3 BASIC13.94□□□□□ -0.18
ODF4Q2M2E3 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC13.94□□□□□ -0.18
ODF4Q2M2E3 AC061975.2-201ENST00000581722 295 ntBASIC13.94□□□□□ -0.18
ODF4Q2M2E3 AC024267.1-201ENST00000582320 895 ntBASIC13.94□□□□□ -0.18
ODF4Q2M2E3 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC13.94□□□□□ -0.18
ODF4Q2M2E3 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
ODF4Q2M2E3 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC13.94□□□□□ -0.18
ODF4Q2M2E3 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC13.94□□□□□ -0.18
ODF4Q2M2E3 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
ODF4Q2M2E3 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
ODF4Q2M2E3 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC13.94□□□□□ -0.18
ODF4Q2M2E3 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
ODF4Q2M2E3 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC13.94□□□□□ -0.18
ODF4Q2M2E3 FOXO1B-201ENST00000504678 1527 ntBASIC13.94□□□□□ -0.18
ODF4Q2M2E3 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC13.94□□□□□ -0.18
ODF4Q2M2E3 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
ODF4Q2M2E3 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
ODF4Q2M2E3 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
ODF4Q2M2E3 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
ODF4Q2M2E3 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC13.94□□□□□ -0.18
ODF4Q2M2E3 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC13.94□□□□□ -0.18
ODF4Q2M2E3 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC13.94□□□□□ -0.18
ODF4Q2M2E3 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
ODF4Q2M2E3 AC099063.4-201ENST00000641099 1602 ntBASIC13.93□□□□□ -0.18
ODF4Q2M2E3 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
ODF4Q2M2E3 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
ODF4Q2M2E3 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
ODF4Q2M2E3 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
ODF4Q2M2E3 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
ODF4Q2M2E3 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
ODF4Q2M2E3 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
ODF4Q2M2E3 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
ODF4Q2M2E3 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
ODF4Q2M2E3 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
ODF4Q2M2E3 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
ODF4Q2M2E3 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
ODF4Q2M2E3 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
ODF4Q2M2E3 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
ODF4Q2M2E3 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
ODF4Q2M2E3 TPM4P1-201ENST00000436100 807 ntBASIC13.93□□□□□ -0.18
ODF4Q2M2E3 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC13.93□□□□□ -0.18
ODF4Q2M2E3 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC13.93□□□□□ -0.18
ODF4Q2M2E3 AC105233.2-201ENST00000523697 349 ntBASIC13.93□□□□□ -0.18
ODF4Q2M2E3 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC13.93□□□□□ -0.18
ODF4Q2M2E3 AF228730.5-201ENST00000530288 346 ntBASIC13.93□□□□□ -0.18
ODF4Q2M2E3 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
ODF4Q2M2E3 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC13.93□□□□□ -0.18
ODF4Q2M2E3 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
ODF4Q2M2E3 AL135744.1-201ENST00000565098 629 ntBASIC13.93□□□□□ -0.18
ODF4Q2M2E3 MIR4313-201ENST00000580760 101 ntBASIC13.93□□□□□ -0.18
ODF4Q2M2E3 AC027307.2-201ENST00000591252 911 ntBASIC13.93□□□□□ -0.18
ODF4Q2M2E3 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC13.93□□□□□ -0.18
ODF4Q2M2E3 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
ODF4Q2M2E3 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
ODF4Q2M2E3 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC13.93□□□□□ -0.18
ODF4Q2M2E3 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
ODF4Q2M2E3 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
ODF4Q2M2E3 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
ODF4Q2M2E3 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC13.93□□□□□ -0.18
ODF4Q2M2E3 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
ODF4Q2M2E3 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
ODF4Q2M2E3 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
ODF4Q2M2E3 USP28-214ENST00000545540 3431 ntTSL 2 BASIC13.93□□□□□ -0.18
ODF4Q2M2E3 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
ODF4Q2M2E3 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
ODF4Q2M2E3 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
ODF4Q2M2E3 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
ODF4Q2M2E3 AL136982.4-201ENST00000437689 1740 ntBASIC13.93□□□□□ -0.18
ODF4Q2M2E3 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms