Protein–RNA interactions for Protein: P63208

SKP1, S-phase kinase-associated protein 1, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1P63208 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
SKP1P63208 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
SKP1P63208 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SKP1P63208 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SKP1P63208 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
SKP1P63208 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
SKP1P63208 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
SKP1P63208 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
SKP1P63208 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC14.9□□□□□ -0.02
SKP1P63208 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
SKP1P63208 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SKP1P63208 SPDYE19P-201ENST00000338590 713 ntBASIC14.9□□□□□ -0.02
SKP1P63208 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
SKP1P63208 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SKP1P63208 PIN1P1-201ENST00000412108 996 ntBASIC14.9□□□□□ -0.02
SKP1P63208 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SKP1P63208 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC14.9□□□□□ -0.02
SKP1P63208 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC14.9□□□□□ -0.02
SKP1P63208 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC14.9□□□□□ -0.02
SKP1P63208 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC14.9□□□□□ -0.02
SKP1P63208 SERBP1P5-201ENST00000510079 1181 ntBASIC14.9□□□□□ -0.02
SKP1P63208 AC104596.2-201ENST00000512793 793 ntBASIC14.9□□□□□ -0.02
SKP1P63208 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SKP1P63208 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC14.9□□□□□ -0.02
SKP1P63208 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
SKP1P63208 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC14.9□□□□□ -0.02
SKP1P63208 MIR3197-201ENST00000582241 73 ntBASIC14.9□□□□□ -0.02
SKP1P63208 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SKP1P63208 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC14.9□□□□□ -0.02
SKP1P63208 LINC01115-203ENST00000606068 577 ntBASIC14.9□□□□□ -0.02
SKP1P63208 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC14.9□□□□□ -0.02
SKP1P63208 AC099568.2-201ENST00000609194 695 ntBASIC14.9□□□□□ -0.02
SKP1P63208 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SKP1P63208 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SKP1P63208 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
SKP1P63208 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SKP1P63208 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC14.9□□□□□ -0.02
SKP1P63208 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC14.9□□□□□ -0.02
SKP1P63208 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC14.9□□□□□ -0.02
SKP1P63208 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SKP1P63208 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
SKP1P63208 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SKP1P63208 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC14.89□□□□□ -0.03
SKP1P63208 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SKP1P63208 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
SKP1P63208 CYP2AB1P-202ENST00000454440 1456 ntBASIC14.89□□□□□ -0.03
SKP1P63208 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SKP1P63208 RERG-209ENST00000546331 1383 ntTSL 2 BASIC14.89□□□□□ -0.03
SKP1P63208 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SKP1P63208 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
SKP1P63208 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SKP1P63208 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SKP1P63208 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
SKP1P63208 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
SKP1P63208 CALY-202ENST00000368555 783 ntTSL 2 BASIC14.89□□□□□ -0.03
SKP1P63208 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
SKP1P63208 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SKP1P63208 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
SKP1P63208 AC236430.1-201ENST00000402231 743 ntBASIC14.89□□□□□ -0.03
SKP1P63208 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SKP1P63208 AL353779.1-201ENST00000434793 351 ntBASIC14.89□□□□□ -0.03
SKP1P63208 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC14.89□□□□□ -0.03
SKP1P63208 SPTLC1P1-201ENST00000447199 261 ntBASIC14.89□□□□□ -0.03
SKP1P63208 UGT1A2P-201ENST00000454886 866 ntBASIC14.89□□□□□ -0.03
SKP1P63208 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SKP1P63208 RPL13AP25-201ENST00000484130 612 ntBASIC14.89□□□□□ -0.03
SKP1P63208 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC14.89□□□□□ -0.03
SKP1P63208 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
SKP1P63208 RARRES2P5-201ENST00000564013 466 ntBASIC14.89□□□□□ -0.03
SKP1P63208 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC14.89□□□□□ -0.03
SKP1P63208 RN7SL204P-201ENST00000582831 262 ntBASIC14.89□□□□□ -0.03
SKP1P63208 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC14.89□□□□□ -0.03
SKP1P63208 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
SKP1P63208 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC14.89□□□□□ -0.03
SKP1P63208 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
SKP1P63208 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC14.89□□□□□ -0.03
SKP1P63208 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SKP1P63208 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC14.89□□□□□ -0.03
SKP1P63208 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SKP1P63208 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SKP1P63208 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SKP1P63208 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
SKP1P63208 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC14.89□□□□□ -0.03
SKP1P63208 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SKP1P63208 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SKP1P63208 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SKP1P63208 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
SKP1P63208 AGK-211ENST00000629555 2765 ntTSL 5 BASIC14.89□□□□□ -0.03
SKP1P63208 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SKP1P63208 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
SKP1P63208 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SKP1P63208 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC14.88□□□□□ -0.03
SKP1P63208 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SKP1P63208 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SKP1P63208 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SKP1P63208 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC14.88□□□□□ -0.03
SKP1P63208 HYMAI-201ENST00000635591 3347 ntBASIC14.88□□□□□ -0.03
SKP1P63208 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SKP1P63208 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC14.88□□□□□ -0.03
SKP1P63208 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 86.9 ms