Protein–RNA interactions for Protein: P60510

PPP4C, Serine/threonine-protein phosphatase 4 catalytic subunit, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4CP60510 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PPP4CP60510 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC18.32■□□□□ 0.52
PPP4CP60510 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PPP4CP60510 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PPP4CP60510 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
PPP4CP60510 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC18.32■□□□□ 0.52
PPP4CP60510 IFNA4-201ENST00000421715 978 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
PPP4CP60510 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC18.32■□□□□ 0.52
PPP4CP60510 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
PPP4CP60510 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC18.32■□□□□ 0.52
PPP4CP60510 AC138951.2-201ENST00000623455 1161 ntBASIC18.32■□□□□ 0.52
PPP4CP60510 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC18.32■□□□□ 0.52
PPP4CP60510 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
PPP4CP60510 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
PPP4CP60510 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PPP4CP60510 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC18.32■□□□□ 0.52
PPP4CP60510 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PPP4CP60510 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC18.32■□□□□ 0.52
PPP4CP60510 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC18.32■□□□□ 0.52
PPP4CP60510 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PPP4CP60510 ACE-204ENST00000428043 5120 ntTSL 2 BASIC18.32■□□□□ 0.52
PPP4CP60510 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PPP4CP60510 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PPP4CP60510 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
PPP4CP60510 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC18.31■□□□□ 0.52
PPP4CP60510 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
PPP4CP60510 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PPP4CP60510 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PPP4CP60510 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
PPP4CP60510 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PPP4CP60510 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
PPP4CP60510 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC18.31■□□□□ 0.52
PPP4CP60510 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PPP4CP60510 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PPP4CP60510 AHCYP2-201ENST00000430630 1300 ntBASIC18.31■□□□□ 0.52
PPP4CP60510 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
PPP4CP60510 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC18.31■□□□□ 0.52
PPP4CP60510 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC18.31■□□□□ 0.52
PPP4CP60510 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PPP4CP60510 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC18.31■□□□□ 0.52
PPP4CP60510 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
PPP4CP60510 NME2-201ENST00000393183 568 ntTSL 2 BASIC18.31■□□□□ 0.52
PPP4CP60510 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC18.31■□□□□ 0.52
PPP4CP60510 EIF3FP3-201ENST00000434851 1086 ntBASIC18.31■□□□□ 0.52
PPP4CP60510 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC18.31■□□□□ 0.52
PPP4CP60510 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC18.31■□□□□ 0.52
PPP4CP60510 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
PPP4CP60510 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC18.31■□□□□ 0.52
PPP4CP60510 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC18.31■□□□□ 0.52
PPP4CP60510 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PPP4CP60510 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PPP4CP60510 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC18.31■□□□□ 0.52
PPP4CP60510 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
PPP4CP60510 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
PPP4CP60510 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PPP4CP60510 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
PPP4CP60510 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PPP4CP60510 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PPP4CP60510 AL139384.1-201ENST00000612143 3047 ntBASIC18.31■□□□□ 0.52
PPP4CP60510 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC18.3■□□□□ 0.52
PPP4CP60510 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PPP4CP60510 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC18.3■□□□□ 0.52
PPP4CP60510 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PPP4CP60510 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PPP4CP60510 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PPP4CP60510 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC18.3■□□□□ 0.52
PPP4CP60510 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PPP4CP60510 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC18.3■□□□□ 0.52
PPP4CP60510 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
PPP4CP60510 STK33P1-201ENST00000423835 1218 ntBASIC18.3■□□□□ 0.52
PPP4CP60510 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PPP4CP60510 PACS1-203ENST00000524815 628 ntTSL 4 BASIC18.3■□□□□ 0.52
PPP4CP60510 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PPP4CP60510 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PPP4CP60510 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC18.3■□□□□ 0.52
PPP4CP60510 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC18.3■□□□□ 0.52
PPP4CP60510 MIR4538-201ENST00000581377 78 ntBASIC18.3■□□□□ 0.52
PPP4CP60510 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
PPP4CP60510 AC010328.2-201ENST00000597698 1111 ntBASIC18.3■□□□□ 0.52
PPP4CP60510 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC18.3■□□□□ 0.52
PPP4CP60510 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
PPP4CP60510 MIR6869-201ENST00000619434 62 ntBASIC18.3■□□□□ 0.52
PPP4CP60510 AL603764.1-201ENST00000636452 321 ntBASIC18.3■□□□□ 0.52
PPP4CP60510 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
PPP4CP60510 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC18.3■□□□□ 0.52
PPP4CP60510 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PPP4CP60510 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PPP4CP60510 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PPP4CP60510 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PPP4CP60510 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PPP4CP60510 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
PPP4CP60510 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
PPP4CP60510 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PPP4CP60510 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
PPP4CP60510 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC18.3■□□□□ 0.52
PPP4CP60510 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC18.3■□□□□ 0.52
PPP4CP60510 PRAL-201ENST00000624952 3286 ntBASIC18.29■□□□□ 0.52
PPP4CP60510 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC18.29■□□□□ 0.52
PPP4CP60510 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC18.29■□□□□ 0.52
PPP4CP60510 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms